EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0035734 (Gene tree)
Gene ID: -
Gene Symbol: Zic3
Alias: Bn|Ka
Full Name: zinc finger protein of the cerebellum 3
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 20303 bases
Position: chrX:53579561-53599863
Accession: 106676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0096294	zf-C2H2	PF00096.26	1.1e-22	1	4
MGP_AJ_P0096294	zf-C2H2	PF00096.26	1.1e-22	2	4
MGP_AJ_P0096294	zf-C2H2	PF00096.26	1.1e-22	3	4
MGP_AJ_P0096294	zf-C2H2	PF00096.26	1.1e-22	4	4
MGP_AJ_P0096293	zf-C2H2	PF00096.26	3.8e-21	1	4
MGP_AJ_P0096293	zf-C2H2	PF00096.26	3.8e-21	2	4
MGP_AJ_P0096293	zf-C2H2	PF00096.26	3.8e-21	3	4
MGP_AJ_P0096293	zf-C2H2	PF00096.26	3.8e-21	4	4
MGP_AJ_P0096295	zf-C2H2	PF00096.26	2.1e-20	1	4
MGP_AJ_P0096295	zf-C2H2	PF00096.26	2.1e-20	2	4
MGP_AJ_P0096295	zf-C2H2	PF00096.26	2.1e-20	3	4
MGP_AJ_P0096295	zf-C2H2	PF00096.26	2.1e-20	4	4
MGP_AJ_P0096294	zf-met	PF12874.7	9.3e-05	1	1
MGP_AJ_P0096295	zf-met	PF12874.7	0.00077	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0096294	-	3084	-	MGP_AJ_P0096294	255 (aa)	-	-
MGP_AJ_T0096295	-	1951	-	MGP_AJ_P0096295	456 (aa)	-	-
MGP_AJ_T0096292	-	566	XM_006527973	MGP_AJ_P0096292	89 (aa)	XP_006528036	Q62521
MGP_AJ_T0096293	-	4053	-	MGP_AJ_P0096293	475 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0035734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0035734	Zic3	75	37.719	MGP_AJ_G0026188	Wt1	51	37.719