EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0015842 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 22626 bases
Position: chr1:31682905-31705530
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0019131	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_AKRJ_P0019135	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0019138	-	1764	-	-	- (aa)	-	-
MGP_AKRJ_T0019129	-	444	-	-	- (aa)	-	-
MGP_AKRJ_T0019135	-	4218	-	MGP_AKRJ_P0019135	237 (aa)	-	-
MGP_AKRJ_T0019134	-	1087	-	-	- (aa)	-	-
MGP_AKRJ_T0019137	-	437	-	-	- (aa)	-	-
MGP_AKRJ_T0019136	-	1966	-	-	- (aa)	-	-
MGP_AKRJ_T0019131	-	4322	-	MGP_AKRJ_P0019131	237 (aa)	-	-
MGP_AKRJ_T0019130	-	2557	-	-	- (aa)	-	-
MGP_AKRJ_T0019133	-	2047	-	-	- (aa)	-	-
MGP_AKRJ_T0019132	-	4398	-	MGP_AKRJ_P0019132	64 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0015842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0015842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0015842	Rab23	75	32.961	MGP_AKRJ_G0019310	Rab37	81	32.961
MGP_AKRJ_G0015842	Rab23	70	33.918	MGP_AKRJ_G0030902	Rab7	94	43.478
MGP_AKRJ_G0015842	Rab23	67	31.765	MGP_AKRJ_G0030280	Rasl11a	69	31.765
MGP_AKRJ_G0015842	Rab23	66	37.654	MGP_AKRJ_G0036011	Rab9b	80	37.654
MGP_AKRJ_G0015842	Rab23	77	31.383	MGP_AKRJ_G0035597	Rab33a	79	31.383
MGP_AKRJ_G0015842	Rab23	74	37.500	MGP_AKRJ_G0032424	Rab30	87	37.500
MGP_AKRJ_G0015842	Rab23	75	34.831	MGP_AKRJ_G0029878	Rab35	95	33.684
MGP_AKRJ_G0015842	Rab23	65	33.766	MGP_AKRJ_G0026897	Rab22a	79	33.766
MGP_AKRJ_G0015842	Rab23	80	30.890	MGP_AKRJ_G0023906	Rab31	93	30.890
MGP_AKRJ_G0015842	Rab23	66	39.873	MGP_AKRJ_G0032484	Rab6a	76	39.873
MGP_AKRJ_G0015842	Rab23	67	35.152	MGP_AKRJ_G0027127	Rab33b	72	35.152
MGP_AKRJ_G0015842	Rab23	72	34.682	MGP_AKRJ_G0019799	Rab15	81	34.682
MGP_AKRJ_G0015842	Rab23	74	35.227	MGP_AKRJ_G0019104	Rab5c	81	35.227
MGP_AKRJ_G0015842	Rab23	65	36.538	MGP_AKRJ_G0035770	Rab39b	73	36.538
MGP_AKRJ_G0015842	Rab23	85	31.683	MGP_AKRJ_G0027328	Rab25	92	31.683
MGP_AKRJ_G0015842	Rab23	86	32.850	MGP_AKRJ_G0021227	Rab2b	94	32.850
MGP_AKRJ_G0015842	Rab23	69	35.119	MGP_AKRJ_G0023915	Rab12	57	35.119
MGP_AKRJ_G0015842	Rab23	77	38.172	MGP_AKRJ_G0017288	Rab36	69	38.172
MGP_AKRJ_G0015842	Rab23	72	35.465	MGP_AKRJ_G0024062	Rab18	83	35.465
MGP_AKRJ_G0015842	Rab23	80	32.984	MGP_AKRJ_G0023460	Rab11b	88	32.984
MGP_AKRJ_G0015842	Rab23	68	33.129	MGP_AKRJ_G0031489	Rasl2-9	74	33.129
MGP_AKRJ_G0015842	Rab23	67	38.125	MGP_AKRJ_G0023815	Rab5a	74	38.125
MGP_AKRJ_G0015842	Rab23	70	34.337	MGP_AKRJ_G0018001	Rab1a	81	34.337
MGP_AKRJ_G0015842	Rab23	83	32.487	MGP_AKRJ_G0027963	Rab2a	95	31.863
MGP_AKRJ_G0015842	Rab23	65	31.410	MGP_AKRJ_G0031382	Kras	94	32.778
MGP_AKRJ_G0015842	Rab23	70	34.337	MGP_AKRJ_G0025597	Rab14	88	35.338
MGP_AKRJ_G0015842	Rab23	61	31.507	MGP_AKRJ_G0033128	Hras	98	30.332
MGP_AKRJ_G0015842	Rab23	61	32.192	MGP_AKRJ_G0027614	Nras	95	35.862
MGP_AKRJ_G0015842	Rab23	70	34.337	MGP_AKRJ_G0024632	Rab1b	83	34.337
MGP_AKRJ_G0015842	Rab23	65	36.129	MGP_AKRJ_G0029273	Rheb	84	36.129
MGP_AKRJ_G0015842	Rab23	80	32.984	MGP_AKRJ_G0034853	Rab11a	92	34.752
MGP_AKRJ_G0015842	Rab23	66	41.139	MGP_AKRJ_G0035105	Rab6b	76	41.139
MGP_AKRJ_G0015842	Rab23	75	32.086	MGP_AKRJ_G0029547	Rasl11b	74	32.086
MGP_AKRJ_G0015842	Rab23	64	38.462	MGP_AKRJ_G0018704	Rab34	60	38.462