EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0016360 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 21379 bases
Position: chr1:123438910-123460288
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0021736	ResIII	PF04851.15	4.6e-06	1	1
MGP_AKRJ_P0021736	DEAD	PF00270.29	1.7e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0021738	-	512	-	MGP_AKRJ_P0021738	170 (aa)	-	-
MGP_AKRJ_T0021739	-	451	-	-	- (aa)	-	-
MGP_AKRJ_T0021736	-	2258	XM_006529794	MGP_AKRJ_P0021736	660 (aa)	XP_006529857	Q8K363
MGP_AKRJ_T0021737	-	622	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0016360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0016360's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0016360	Ddx18	61	38.462	MGP_AKRJ_G0026844	Ddx27	53	38.221
MGP_AKRJ_G0016360	Ddx18	55	32.990	MGP_AKRJ_G0018800	Ddx52	68	31.935
MGP_AKRJ_G0016360	Ddx18	56	34.974	MGP_AKRJ_G0034977	Ddx43	55	34.974
MGP_AKRJ_G0016360	Ddx18	55	38.525	MGP_AKRJ_G0031315	Ddx47	88	37.705
MGP_AKRJ_G0016360	Ddx18	52	33.333	MGP_AKRJ_G0022013	Ddx17	53	33.333
MGP_AKRJ_G0016360	Ddx18	64	32.294	MGP_AKRJ_G0029912	Ddx54	50	32.366
MGP_AKRJ_G0016360	Ddx18	50	30.628	MGP_AKRJ_G0029794	Ddx51	59	31.070
MGP_AKRJ_G0016360	Ddx18	51	30.769	MGP_AKRJ_G0033748	Ddx39	81	30.312
MGP_AKRJ_G0016360	Ddx18	56	36.148	MGP_AKRJ_G0033607	Ddx49	92	37.135
MGP_AKRJ_G0016360	Ddx18	50	32.628	MGP_AKRJ_G0018483	Eif4a1	90	31.830
MGP_AKRJ_G0016360	Ddx18	53	33.144	MGP_AKRJ_G0016489	Ddx59	55	33.144
MGP_AKRJ_G0016360	Ddx18	66	46.241	MGP_AKRJ_G0034716	Ddx10	50	46.241
MGP_AKRJ_G0016360	Ddx18	53	32.386	MGP_AKRJ_G0019250	Ddx5	74	31.699
MGP_AKRJ_G0016360	Ddx18	53	33.155	MGP_AKRJ_G0016865	D1Pas1	56	33.155
MGP_AKRJ_G0016360	Ddx18	68	36.192	MGP_AKRJ_G0030001	Ddx55	77	36.042
MGP_AKRJ_G0016360	Ddx18	65	36.327	MGP_AKRJ_G0025480	Ddx31	72	36.327
MGP_AKRJ_G0016360	Ddx18	50	34.111	MGP_AKRJ_G0020534	Ddx41	54	34.111