EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0017543 (Gene tree)
Gene ID: -
Gene Symbol: Prdm4
Alias: 1700031E19Rik|2810470D21Rik|AW552272|SC-1|SC1
Full Name: PR domain containing 4
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 35014 bases
Position: chr10:86273662-86308675
Accession: 1920093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0026606	zf-C2H2	PF00096.26	2e-20	1	2
MGP_AKRJ_P0026606	zf-C2H2	PF00096.26	2e-20	2	2
MGP_AKRJ_P0026606	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0026605	-	3221	XM_006514193	MGP_AKRJ_P0026605	555 (aa)	XP_006514256	Q80V63
MGP_AKRJ_T0026606	-	3779	-	MGP_AKRJ_P0026606	757 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0017543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0017543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0017543	Prdm4	78	44.767	MGP_AKRJ_G0023182	Zfp945	79	45.122
MGP_AKRJ_G0017543	Prdm4	63	38.158	MGP_AKRJ_G0030729	Prdm5	99	38.194
MGP_AKRJ_G0017543	Prdm4	65	36.486	MGP_AKRJ_G0025534	Prdm12	68	36.486