EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0017955 (Gene tree)
Gene ID: -
Gene Symbol: Ddx56
Alias: 2600001H07Rik|D11Ertd619e|NOH61|Noh61
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 56
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 8851 bases
Position: chr11:3379794-3388644
Accession: 1277172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0027899	ResIII	PF04851.15	9.5e-07	1	1
MGP_AKRJ_P0027899	DEAD	PF00270.29	6.9e-40	1	1
MGP_AKRJ_P0027901	DEAD	PF00270.29	5.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0027901	-	764	-	MGP_AKRJ_P0027901	237 (aa)	-	-
MGP_AKRJ_T0027900	-	527	-	-	- (aa)	-	-
MGP_AKRJ_T0027902	-	621	-	-	- (aa)	-	-
MGP_AKRJ_T0027899	-	1956	XM_011243731	MGP_AKRJ_P0027899	546 (aa)	XP_011242033	Q9D0R4

Gene Model

Click here to download MGP_AKRJ_G0017955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0017955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0017955	Ddx56	66	30.789	MGP_AKRJ_G0016865	D1Pas1	52	30.159
MGP_AKRJ_G0017955	Ddx56	97	30.328	MGP_AKRJ_G0022614	Eif4a2	63	30.736
MGP_AKRJ_G0017955	Ddx56	99	35.887	MGP_AKRJ_G0031315	Ddx47	86	38.889
MGP_AKRJ_G0017955	Ddx56	94	32.927	MGP_AKRJ_G0033607	Ddx49	97	30.513
MGP_AKRJ_G0017955	Ddx56	98	33.065	MGP_AKRJ_G0026844	Ddx27	53	31.019
MGP_AKRJ_G0017955	Ddx56	97	30.041	MGP_AKRJ_G0018483	Eif4a1	87	30.051
MGP_AKRJ_G0017955	Ddx56	80	33.493	MGP_AKRJ_G0018800	Ddx52	61	30.597
MGP_AKRJ_G0017955	Ddx56	82	50.000	MGP_AKRJ_G0019542	Ddx1	53	50.847
MGP_AKRJ_G0017955	Ddx56	95	30.116	MGP_AKRJ_G0034038	Ddx19a	50	30.040
MGP_AKRJ_G0017955	Ddx56	61	32.051	MGP_AKRJ_G0033748	Ddx39	74	34.969