EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0018144 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 9706 bases
Position: chr11:47425432-47435137
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0028663	MMR_HSR1	PF01926.23	5.6e-05	1	1
MGP_AKRJ_P0028662	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0028661	-	3832	-	-	- (aa)	-	-
MGP_AKRJ_T0028663	-	1213	-	MGP_AKRJ_P0028663	288 (aa)	-	-
MGP_AKRJ_T0028662	-	2259	-	MGP_AKRJ_P0028662	409 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0018144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0018144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0018144	Irgm1	83	62.185	MGP_AKRJ_G0018285	Irgm2	92	50.135
MGP_AKRJ_G0018144	Irgm1	89	56.031	MGP_AKRJ_G0018284	Igtp	90	49.740
MGP_AKRJ_G0018144	Irgm1	76	35.169	MGP_AKRJ_G0031736	Irgc1	71	30.183
MGP_AKRJ_G0018144	Irgm1	75	33.028	MGP_AKRJ_G0024396	F830016B08Rik	78	33.028
MGP_AKRJ_G0018144	Irgm1	93	33.696	MGP_AKRJ_G0024397	Iigp1	79	32.515
MGP_AKRJ_G0018144	Irgm1	86	34.118	MGP_AKRJ_G0024395	Gm4841	89	31.989
MGP_AKRJ_G0018144	Irgm1	79	36.864	MGP_AKRJ_G0024394	Gm4951	77	33.013
MGP_AKRJ_G0018144	Irgm1	82	39.095	MGP_AKRJ_G0018145	-	72	36.667
MGP_AKRJ_G0018144	Irgm1	84	38.554	MGP_AKRJ_G0018146	-	81	33.245
MGP_AKRJ_G0018144	Irgm1	95	30.976	MGP_AKRJ_G0018153	Ifi47	97	30.976
MGP_AKRJ_G0018144	Irgm1	82	39.095	MGP_AKRJ_G0018152	-	72	36.667