EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0018800 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 20998 bases
Position: chr11:84514335-84535332
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0031240	ResIII	PF04851.15	9.9e-06	1	1
MGP_AKRJ_P0031240	DEAD	PF00270.29	5.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0031241	-	553	-	-	- (aa)	-	-
MGP_AKRJ_T0031240	-	3194	-	MGP_AKRJ_P0031240	598 (aa)	-	Q8K301

Gene Model

Click here to download MGP_AKRJ_G0018800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0018800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0018800	Ddx52	68	30.456	MGP_AKRJ_G0022013	Ddx17	62	30.843
MGP_AKRJ_G0018800	Ddx52	58	30.900	MGP_AKRJ_G0029794	Ddx51	64	30.900
MGP_AKRJ_G0018800	Ddx52	73	32.648	MGP_AKRJ_G0016489	Ddx59	64	33.741
MGP_AKRJ_G0018800	Ddx52	60	32.044	MGP_AKRJ_G0022614	Eif4a2	90	30.240
MGP_AKRJ_G0018800	Ddx52	66	34.069	MGP_AKRJ_G0020863	Ddx4	57	34.069
MGP_AKRJ_G0018800	Ddx52	70	30.222	MGP_AKRJ_G0022238	Ddx23	54	30.243
MGP_AKRJ_G0018800	Ddx52	66	32.530	MGP_AKRJ_G0016865	D1Pas1	61	32.530
MGP_AKRJ_G0018800	Ddx52	58	33.428	MGP_AKRJ_G0031315	Ddx47	83	32.011
MGP_AKRJ_G0018800	Ddx52	66	31.204	MGP_AKRJ_G0019250	Ddx5	68	31.204
MGP_AKRJ_G0018800	Ddx52	61	30.597	MGP_AKRJ_G0017955	Ddx56	80	33.493
MGP_AKRJ_G0018800	Ddx52	61	30.081	MGP_AKRJ_G0033607	Ddx49	76	30.081
MGP_AKRJ_G0018800	Ddx52	62	30.750	MGP_AKRJ_G0030001	Ddx55	61	30.750
MGP_AKRJ_G0018800	Ddx52	68	30.733	MGP_AKRJ_G0020534	Ddx41	65	31.026
MGP_AKRJ_G0018800	Ddx52	68	31.935	MGP_AKRJ_G0016360	Ddx18	55	32.990
MGP_AKRJ_G0018800	Ddx52	60	31.768	MGP_AKRJ_G0018483	Eif4a1	87	31.768
MGP_AKRJ_G0018800	Ddx52	60	41.071	MGP_AKRJ_G0019542	Ddx1	55	41.071
MGP_AKRJ_G0018800	Ddx52	69	34.135	MGP_AKRJ_G0034977	Ddx43	63	34.135