EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0018857 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 6378 bases
Position: chr11:88873431-88879808
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0031500	RRM_1	PF00076.22	6.2e-34	1	2
MGP_AKRJ_P0031500	RRM_1	PF00076.22	6.2e-34	2	2
MGP_AKRJ_P0031499	RRM_1	PF00076.22	2.4e-33	1	2
MGP_AKRJ_P0031499	RRM_1	PF00076.22	2.4e-33	2	2
MGP_AKRJ_P0031502	RRM_1	PF00076.22	2.6e-33	1	2
MGP_AKRJ_P0031502	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0031499	-	5357	-	MGP_AKRJ_P0031499	248 (aa)	-	Q6PDM2
MGP_AKRJ_T0031504	-	401	-	MGP_AKRJ_P0031504	57 (aa)	-	-
MGP_AKRJ_T0031505	-	758	-	-	- (aa)	-	-
MGP_AKRJ_T0031502	-	1209	-	MGP_AKRJ_P0031502	253 (aa)	-	-
MGP_AKRJ_T0031503	-	895	-	MGP_AKRJ_P0031503	105 (aa)	-	-
MGP_AKRJ_T0031500	-	2948	-	MGP_AKRJ_P0031500	201 (aa)	-	-
MGP_AKRJ_T0031501	-	647	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0018857's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0018857	Srsf1	82	42.857	MGP_AKRJ_G0026750	Srsf6	58	40.670
MGP_AKRJ_G0018857	Srsf1	85	44.318	MGP_AKRJ_G0019828	Srsf5	96	51.020
MGP_AKRJ_G0018857	Srsf1	79	79.762	MGP_AKRJ_G0029868	Srsf9	78	70.330