EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0018862 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 391012 bases
Position: chr11:89189923-89580934
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0031521	RRM_1	PF00076.22	6.3e-34	1	2
MGP_AKRJ_P0031521	RRM_1	PF00076.22	6.3e-34	2	2
MGP_AKRJ_P0031522	RRM_1	PF00076.22	6.6e-34	1	2
MGP_AKRJ_P0031522	RRM_1	PF00076.22	6.6e-34	2	2
MGP_AKRJ_P0031526	RRM_1	PF00076.22	3.9e-22	1	1
MGP_AKRJ_P0031527	RRM_1	PF00076.22	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0031524	-	1749	-	-	- (aa)	-	-
MGP_AKRJ_T0031525	-	2538	-	-	- (aa)	-	-
MGP_AKRJ_T0031526	-	405	-	MGP_AKRJ_P0031526	113 (aa)	-	-
MGP_AKRJ_T0031527	-	665	-	MGP_AKRJ_P0031527	157 (aa)	-	-
MGP_AKRJ_T0031521	-	5924	XM_006534432	MGP_AKRJ_P0031521	328 (aa)	XP_006534495	Q920Q6
MGP_AKRJ_T0031522	-	1857	-	MGP_AKRJ_P0031522	346 (aa)	-	-
MGP_AKRJ_T0031523	-	825	-	MGP_AKRJ_P0031523	274 (aa)	-	-
MGP_AKRJ_T0031528	-	626	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0018862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0018862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0018862	Msi2	100	44.348	MGP_AKRJ_G0030630	Hnrnpa2b1	80	35.165
MGP_AKRJ_G0018862	Msi2	99	41.228	MGP_AKRJ_G0020559	Hnrnpa0	60	41.989
MGP_AKRJ_G0018862	Msi2	100	54.867	MGP_AKRJ_G0029694	Hnrnpdl	78	41.634
MGP_AKRJ_G0018862	Msi2	99	42.400	MGP_AKRJ_G0017431	Dazap1	92	49.462
MGP_AKRJ_G0018862	Msi2	61	42.857	MGP_AKRJ_G0033715	-	68	45.205
MGP_AKRJ_G0018862	Msi2	84	30.208	MGP_AKRJ_G0028486	Elavl4	78	30.088
MGP_AKRJ_G0018862	Msi2	100	45.217	MGP_AKRJ_G0025802	Hnrnpa3	63	41.593
MGP_AKRJ_G0018862	Msi2	80	34.074	MGP_AKRJ_G0026890	Rbm38	70	38.095
MGP_AKRJ_G0018862	Msi2	61	43.243	MGP_AKRJ_G0017425	Cirbp	92	43.243
MGP_AKRJ_G0018862	Msi2	58	35.616	MGP_AKRJ_G0032997	Tial1	59	35.616
MGP_AKRJ_G0018862	Msi2	62	45.205	MGP_AKRJ_G0035651	Rbmx	89	45.205
MGP_AKRJ_G0018862	Msi2	100	53.982	MGP_AKRJ_G0029692	Hnrnpd	100	72.000
MGP_AKRJ_G0018862	Msi2	66	30.000	MGP_AKRJ_G0015974	Boll	65	32.857
MGP_AKRJ_G0018862	Msi2	60	33.824	MGP_AKRJ_G0019921	Slirp	70	33.824
MGP_AKRJ_G0018862	Msi2	100	52.212	MGP_AKRJ_G0018208	Hnrnpab	75	44.813
MGP_AKRJ_G0018862	Msi2	61	42.857	MGP_AKRJ_G0035451	Rbm3	82	43.243
MGP_AKRJ_G0018862	Msi2	100	90.323	MGP_AKRJ_G0029872	Msi1	99	75.665
MGP_AKRJ_G0018862	Msi2	70	31.250	MGP_AKRJ_G0028355	Elavl2	75	31.959
MGP_AKRJ_G0018862	Msi2	100	35.398	MGP_AKRJ_G0029042	Tardbp	79	31.818