EuRBPDB

Description

Ensembl ID: MGP_AKRJ_G0018931 (Gene tree)
Gene ID: -
Gene Symbol: Igf2bp1
Alias: AL024068|AW549074|CRD-BP|Crdbp|D030026A21Rik|D11Moh40e|D11Moh45|IMP-1|Neilsen|Vickz1|ZBP-1|Zbp1|mir-3063
Full Name: insulin-like growth factor 2 mRNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 51939 bases
Position: chr11:97135494-97187432
Accession: 1890357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0031796	KH_1	PF00013.29	4.8e-56	1	4
MGP_AKRJ_P0031796	KH_1	PF00013.29	4.8e-56	2	4
MGP_AKRJ_P0031796	KH_1	PF00013.29	4.8e-56	3	4
MGP_AKRJ_P0031796	KH_1	PF00013.29	4.8e-56	4	4
MGP_AKRJ_P0031796	RRM_1	PF00076.22	2e-16	1	2
MGP_AKRJ_P0031796	RRM_1	PF00076.22	2e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0031799	-	586	-	-	- (aa)	-	-
MGP_AKRJ_T0031798	-	576	-	-	- (aa)	-	-
MGP_AKRJ_T0031797	-	690	-	-	- (aa)	-	-
MGP_AKRJ_T0031796	-	8420	-	MGP_AKRJ_P0031796	577 (aa)	-	O88477
MGP_AKRJ_T0031800	-	1108	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0018931	Igf2bp1	60	33.333	MGP_AKRJ_G0017328	Pcbp3	66	33.582
MGP_AKRJ_G0018931	Igf2bp1	100	72.727	MGP_AKRJ_G0030617	Igf2bp3	100	72.727
MGP_AKRJ_G0018931	Igf2bp1	100	64.677	MGP_AKRJ_G0022603	Igf2bp2	99	64.618
MGP_AKRJ_G0018931	Igf2bp1	59	30.597	MGP_AKRJ_G0035143	-	84	32.039