EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0019104 (Gene tree)
Gene ID: -
Gene Symbol: Rab5c
Alias: AI326010|Rab5C|Rabl
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 31473 bases
Position: chr11:102236676-102268148
Accession: 105306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0032337	MMR_HSR1	PF01926.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0032340	-	441	-	MGP_AKRJ_P0032340	34 (aa)	-	-
MGP_AKRJ_T0032337	-	1914	XM_006532586	MGP_AKRJ_P0032337	216 (aa)	XP_006532649	P35278
MGP_AKRJ_T0032338	-	1966	-	MGP_AKRJ_P0032338	234 (aa)	-	-
MGP_AKRJ_T0032339	-	412	-	MGP_AKRJ_P0032339	83 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0019104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0019104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0019104	Rab5c	83	30.000	MGP_AKRJ_G0027614	Nras	99	33.333
MGP_AKRJ_G0019104	Rab5c	75	48.447	MGP_AKRJ_G0023460	Rab11b	74	48.447
MGP_AKRJ_G0019104	Rab5c	94	41.379	MGP_AKRJ_G0035105	Rab6b	98	41.379
MGP_AKRJ_G0019104	Rab5c	86	38.806	MGP_AKRJ_G0023915	Rab12	75	36.000
MGP_AKRJ_G0019104	Rab5c	73	35.625	MGP_AKRJ_G0017288	Rab36	60	35.625
MGP_AKRJ_G0019104	Rab5c	81	31.250	MGP_AKRJ_G0029273	Rheb	93	31.250
MGP_AKRJ_G0019104	Rab5c	89	37.113	MGP_AKRJ_G0029878	Rab35	96	37.436
MGP_AKRJ_G0019104	Rab5c	75	45.062	MGP_AKRJ_G0024062	Rab18	78	45.062
MGP_AKRJ_G0019104	Rab5c	89	43.590	MGP_AKRJ_G0018001	Rab1a	95	43.590
MGP_AKRJ_G0019104	Rab5c	90	41.262	MGP_AKRJ_G0034853	Rab11a	88	49.630
MGP_AKRJ_G0019104	Rab5c	90	38.974	MGP_AKRJ_G0027963	Rab2a	92	38.974
MGP_AKRJ_G0019104	Rab5c	89	35.859	MGP_AKRJ_G0036011	Rab9b	97	35.859
MGP_AKRJ_G0019104	Rab5c	78	42.012	MGP_AKRJ_G0032424	Rab30	83	42.012
MGP_AKRJ_G0019104	Rab5c	78	32.544	MGP_AKRJ_G0031489	Rasl2-9	77	32.544
MGP_AKRJ_G0019104	Rab5c	78	32.544	MGP_AKRJ_G0031382	Kras	98	30.102
MGP_AKRJ_G0019104	Rab5c	75	36.585	MGP_AKRJ_G0035770	Rab39b	77	36.585
MGP_AKRJ_G0019104	Rab5c	81	44.000	MGP_AKRJ_G0032484	Rab6a	84	44.000
MGP_AKRJ_G0019104	Rab5c	91	46.939	MGP_AKRJ_G0023906	Rab31	98	46.939
MGP_AKRJ_G0019104	Rab5c	55	31.967	MGP_AKRJ_G0031002	Arl8b	62	31.967
MGP_AKRJ_G0019104	Rab5c	55	31.707	MGP_AKRJ_G0016465	Arl8a	62	31.707
MGP_AKRJ_G0019104	Rab5c	81	35.227	MGP_AKRJ_G0015842	Rab23	74	35.227
MGP_AKRJ_G0019104	Rab5c	71	35.948	MGP_AKRJ_G0022175	Rabl2	67	35.948
MGP_AKRJ_G0019104	Rab5c	89	44.330	MGP_AKRJ_G0024632	Rab1b	96	44.330
MGP_AKRJ_G0019104	Rab5c	90	47.423	MGP_AKRJ_G0026897	Rab22a	98	47.423
MGP_AKRJ_G0019104	Rab5c	89	36.318	MGP_AKRJ_G0035597	Rab33a	85	36.318
MGP_AKRJ_G0019104	Rab5c	100	87.500	MGP_AKRJ_G0023815	Rab5a	100	87.500
MGP_AKRJ_G0019104	Rab5c	93	37.379	MGP_AKRJ_G0027127	Rab33b	89	37.379
MGP_AKRJ_G0019104	Rab5c	89	40.206	MGP_AKRJ_G0021227	Rab2b	90	40.206
MGP_AKRJ_G0019104	Rab5c	77	42.442	MGP_AKRJ_G0030902	Rab7	90	47.727
MGP_AKRJ_G0019104	Rab5c	89	41.089	MGP_AKRJ_G0027328	Rab25	93	41.089
MGP_AKRJ_G0019104	Rab5c	98	40.845	MGP_AKRJ_G0019310	Rab37	95	40.845
MGP_AKRJ_G0019104	Rab5c	81	33.702	MGP_AKRJ_G0033128	Hras	94	33.702
MGP_AKRJ_G0019104	Rab5c	73	31.875	MGP_AKRJ_G0018704	Rab34	62	31.875
MGP_AKRJ_G0019104	Rab5c	86	39.785	MGP_AKRJ_G0025597	Rab14	89	40.741
MGP_AKRJ_G0019104	Rab5c	89	35.784	MGP_AKRJ_G0019799	Rab15	95	35.784