EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AKRJ_G0019408 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_akrj
Status
putative
Strand
Minus strand
Length
428628 bases
Position
chr11:120935566-121364193
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AKRJ_P0033821Fox-1_CPF12414.82.3e-4511
MGP_AKRJ_P0033824Fox-1_CPF12414.82.3e-4511
MGP_AKRJ_P0033825Fox-1_CPF12414.82.3e-4511
MGP_AKRJ_P0033823Fox-1_CPF12414.82.4e-4111
MGP_AKRJ_P0033822Fox-1_CPF12414.82.5e-4111
MGP_AKRJ_P0033820Fox-1_CPF12414.82.9e-4111
MGP_AKRJ_P0033826Fox-1_CPF12414.81.6e-2111
MGP_AKRJ_P0033827RRM_1PF00076.223.2e-1911
MGP_AKRJ_P0033821RRM_1PF00076.221.5e-1811
MGP_AKRJ_P0033824RRM_1PF00076.221.5e-1811
MGP_AKRJ_P0033825RRM_1PF00076.221.7e-1811
MGP_AKRJ_P0033820RRM_1PF00076.221.9e-1811
MGP_AKRJ_P0033822RRM_1PF00076.222.1e-1811
MGP_AKRJ_P0033826RRM_1PF00076.221.9e-1411
MGP_AKRJ_P0033823RRM_1PF00076.220.000311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AKRJ_T0033829-369--- (aa)--
MGP_AKRJ_T0033828-301--- (aa)--
MGP_AKRJ_T0033823-1553-MGP_AKRJ_P0033823329 (aa)--
MGP_AKRJ_T0033822-3140-MGP_AKRJ_P0033822374 (aa)--
MGP_AKRJ_T0033821-2809-MGP_AKRJ_P0033821313 (aa)--
MGP_AKRJ_T0033820-3084XM_006533722MGP_AKRJ_P0033820360 (aa)XP_006533785Q8BIF2
MGP_AKRJ_T0033827-900-MGP_AKRJ_P0033827169 (aa)--
MGP_AKRJ_T0033826-710-MGP_AKRJ_P0033826145 (aa)--
MGP_AKRJ_T0033825-2150-MGP_AKRJ_P0033825327 (aa)--
MGP_AKRJ_T0033824-1542-MGP_AKRJ_P0033824313 (aa)--
Gene Model
Click here to download MGP_AKRJ_G0019408's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0019408's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AKRJ_G0019408Rbfox310071.930MGP_AKRJ_G0022429Rbfox19165.123
MGP_AKRJ_G0019408Rbfox36739.130MGP_AKRJ_G0028651Pabpc47736.709
MGP_AKRJ_G0019408Rbfox39961.932MGP_AKRJ_G0021962Rbfox29161.972
MGP_AKRJ_G0019408Rbfox37231.429MGP_AKRJ_G0015974Boll5043.939
MGP_AKRJ_G0019408Rbfox35331.868MGP_AKRJ_G0032997Tial18131.111

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