EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0019828 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 6141 bases
Position: chr12:80533738-80539878
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0035145	RRM_1	PF00076.22	1.8e-30	1	2
MGP_AKRJ_P0035145	RRM_1	PF00076.22	1.8e-30	2	2
MGP_AKRJ_P0035149	RRM_1	PF00076.22	1.8e-30	1	2
MGP_AKRJ_P0035149	RRM_1	PF00076.22	1.8e-30	2	2
MGP_AKRJ_P0035155	RRM_1	PF00076.22	1.8e-30	1	2
MGP_AKRJ_P0035155	RRM_1	PF00076.22	1.8e-30	2	2
MGP_AKRJ_P0035147	RRM_1	PF00076.22	1.9e-30	1	2
MGP_AKRJ_P0035147	RRM_1	PF00076.22	1.9e-30	2	2
MGP_AKRJ_P0035150	RRM_1	PF00076.22	1.9e-30	1	2
MGP_AKRJ_P0035150	RRM_1	PF00076.22	1.9e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0035151	-	538	-	-	- (aa)	-	-
MGP_AKRJ_T0035150	-	1459	-	MGP_AKRJ_P0035150	274 (aa)	-	-
MGP_AKRJ_T0035153	-	547	-	MGP_AKRJ_P0035153	46 (aa)	-	-
MGP_AKRJ_T0035152	-	886	-	-	- (aa)	-	-
MGP_AKRJ_T0035146	-	2901	-	-	- (aa)	-	-
MGP_AKRJ_T0035147	-	1471	-	MGP_AKRJ_P0035147	274 (aa)	-	-
MGP_AKRJ_T0035145	-	1488	XM_006515629	MGP_AKRJ_P0035145	273 (aa)	XP_006515692	O35326
MGP_AKRJ_T0035148	-	2681	-	-	- (aa)	-	-
MGP_AKRJ_T0035149	-	1452	-	MGP_AKRJ_P0035149	273 (aa)	-	-
MGP_AKRJ_T0035156	-	3444	-	-	- (aa)	-	-
MGP_AKRJ_T0035155	-	1529	-	MGP_AKRJ_P0035155	273 (aa)	-	-
MGP_AKRJ_T0035154	-	490	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0019828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0019828	Srsf5	96	51.020	MGP_AKRJ_G0018857	Srsf1	85	44.318
MGP_AKRJ_G0019828	Srsf5	89	63.415	MGP_AKRJ_G0026750	Srsf6	50	71.642
MGP_AKRJ_G0019828	Srsf5	89	48.780	MGP_AKRJ_G0029868	Srsf9	68	39.394