EuRBPDB

Description

Ensembl ID: MGP_AKRJ_G0020565 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpk
Alias: Hnrpk|Hnrpk {ECO:0000313|EMBL:AAH89328.1,GN ECO:0000313|MGI:MGI:99894}|KBBP|NOVA|hnRNPK
Full Name: heterogeneous nuclear ribonucleoprotein K
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 13179 bases
Position: chr13:57539508-57552686
Accession: 99894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0037189	KH_1	PF00013.29	2.4e-43	1	3
MGP_AKRJ_P0037189	KH_1	PF00013.29	2.4e-43	2	3
MGP_AKRJ_P0037189	KH_1	PF00013.29	2.4e-43	3	3
MGP_AKRJ_P0037190	KH_1	PF00013.29	2.4e-43	1	3
MGP_AKRJ_P0037190	KH_1	PF00013.29	2.4e-43	2	3
MGP_AKRJ_P0037190	KH_1	PF00013.29	2.4e-43	3	3
MGP_AKRJ_P0037188	KH_1	PF00013.29	3e-43	1	3
MGP_AKRJ_P0037188	KH_1	PF00013.29	3e-43	2	3
MGP_AKRJ_P0037188	KH_1	PF00013.29	3e-43	3	3
MGP_AKRJ_P0037191	KH_1	PF00013.29	3e-43	1	3
MGP_AKRJ_P0037191	KH_1	PF00013.29	3e-43	2	3
MGP_AKRJ_P0037191	KH_1	PF00013.29	3e-43	3	3
MGP_AKRJ_P0037192	KH_1	PF00013.29	2.3e-33	1	2
MGP_AKRJ_P0037192	KH_1	PF00013.29	2.3e-33	2	2
MGP_AKRJ_P0037196	KH_1	PF00013.29	1.1e-23	1	2
MGP_AKRJ_P0037196	KH_1	PF00013.29	1.1e-23	2	2
MGP_AKRJ_P0037193	KH_1	PF00013.29	1.6e-23	1	2
MGP_AKRJ_P0037193	KH_1	PF00013.29	1.6e-23	2	2
MGP_AKRJ_P0037199	KH_1	PF00013.29	2.9e-23	1	2
MGP_AKRJ_P0037199	KH_1	PF00013.29	2.9e-23	2	2
MGP_AKRJ_P0037201	KH_1	PF00013.29	3.3e-09	1	1
MGP_AKRJ_P0037203	KH_1	PF00013.29	6.6e-09	1	1
MGP_AKRJ_P0037198	KH_1	PF00013.29	3.4e-05	1	1
MGP_AKRJ_P0037203	KH_2	PF07650.17	0.00011	1	1
MGP_AKRJ_P0037198	KH_2	PF07650.17	0.00023	1	1
MGP_AKRJ_P0037198	ROKNT	PF08067.11	2e-27	1	1
MGP_AKRJ_P0037193	ROKNT	PF08067.11	3e-27	1	1
MGP_AKRJ_P0037203	ROKNT	PF08067.11	3.6e-27	1	1
MGP_AKRJ_P0037189	ROKNT	PF08067.11	7.8e-27	1	1
MGP_AKRJ_P0037190	ROKNT	PF08067.11	7.8e-27	1	1
MGP_AKRJ_P0037196	ROKNT	PF08067.11	1.9e-26	1	1
MGP_AKRJ_P0037188	ROKNT	PF08067.11	4e-26	1	1
MGP_AKRJ_P0037191	ROKNT	PF08067.11	4e-26	1	1
MGP_AKRJ_P0037199	ROKNT	PF08067.11	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0037203	-	1053	-	MGP_AKRJ_P0037203	97 (aa)	-	-
MGP_AKRJ_T0037202	-	775	-	-	- (aa)	-	-
MGP_AKRJ_T0037201	-	476	-	MGP_AKRJ_P0037201	87 (aa)	-	-
MGP_AKRJ_T0037200	-	833	-	-	- (aa)	-	-
MGP_AKRJ_T0037199	-	676	-	MGP_AKRJ_P0037199	178 (aa)	-	-
MGP_AKRJ_T0037198	-	723	-	MGP_AKRJ_P0037198	77 (aa)	-	-
MGP_AKRJ_T0037197	-	459	-	-	- (aa)	-	-
MGP_AKRJ_T0037196	-	900	-	MGP_AKRJ_P0037196	256 (aa)	-	-
MGP_AKRJ_T0037195	-	737	-	-	- (aa)	-	-
MGP_AKRJ_T0037194	-	522	-	-	- (aa)	-	-
MGP_AKRJ_T0037193	-	1004	-	MGP_AKRJ_P0037193	299 (aa)	-	-
MGP_AKRJ_T0037192	-	2325	-	MGP_AKRJ_P0037192	395 (aa)	-	-
MGP_AKRJ_T0037191	-	2549	-	MGP_AKRJ_P0037191	464 (aa)	-	-
MGP_AKRJ_T0037190	-	2439	-	MGP_AKRJ_P0037190	440 (aa)	-	-
MGP_AKRJ_T0037204	-	780	-	-	- (aa)	-	-
MGP_AKRJ_T0037188	-	2783	XM_006517103	MGP_AKRJ_P0037188	464 (aa)	XP_006517166	P61979
MGP_AKRJ_T0037189	-	2632	-	MGP_AKRJ_P0037189	440 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0020565	Hnrnpk	57	37.681	MGP_AKRJ_G0031651	Nova2	54	37.681
MGP_AKRJ_G0020565	Hnrnpk	93	98.745	MGP_AKRJ_G0032366	-	98	98.745
MGP_AKRJ_G0020565	Hnrnpk	57	34.615	MGP_AKRJ_G0027913	Fubp1	53	34.615
MGP_AKRJ_G0020565	Hnrnpk	78	31.724	MGP_AKRJ_G0030875	Pcbp1	85	42.857
MGP_AKRJ_G0020565	Hnrnpk	59	51.316	MGP_AKRJ_G0017328	Pcbp3	79	41.667
MGP_AKRJ_G0020565	Hnrnpk	78	32.414	MGP_AKRJ_G0035143	-	86	33.728
MGP_AKRJ_G0020565	Hnrnpk	56	39.062	MGP_AKRJ_G0019649	Nova1	56	39.062
MGP_AKRJ_G0020565	Hnrnpk	78	31.724	MGP_AKRJ_G0022352	Pcbp2	84	44.444