EuRBPDB

Description

Ensembl ID: MGP_AKRJ_G0020602 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 92689 bases
Position: chr13:63532766-63625454
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0037314	ResIII	PF04851.15	1.5e-11	1	1
MGP_AKRJ_P0037317	ResIII	PF04851.15	1.9e-11	1	1
MGP_AKRJ_P0037315	ResIII	PF04851.15	2e-11	1	1
MGP_AKRJ_P0037312	ResIII	PF04851.15	1.1e-10	1	1
MGP_AKRJ_P0037318	ResIII	PF04851.15	1.3e-10	1	1
MGP_AKRJ_P0037311	ResIII	PF04851.15	8.4e-10	1	1
MGP_AKRJ_P0037314	DEAD	PF00270.29	3.5e-07	1	1
MGP_AKRJ_P0037318	DEAD	PF00270.29	4.1e-07	1	1
MGP_AKRJ_P0037317	DEAD	PF00270.29	5.2e-07	1	1
MGP_AKRJ_P0037315	DEAD	PF00270.29	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0037319	-	759	-	MGP_AKRJ_P0037319	152 (aa)	-	-
MGP_AKRJ_T0037318	-	1726	-	MGP_AKRJ_P0037318	574 (aa)	-	-
MGP_AKRJ_T0037311	-	1592	-	MGP_AKRJ_P0037311	467 (aa)	-	Q9JIM3
MGP_AKRJ_T0037313	-	1820	-	-	- (aa)	-	-
MGP_AKRJ_T0037312	-	3436	-	MGP_AKRJ_P0037312	842 (aa)	-	-
MGP_AKRJ_T0037315	-	2693	-	MGP_AKRJ_P0037315	699 (aa)	-	-
MGP_AKRJ_T0037314	-	1888	-	MGP_AKRJ_P0037314	582 (aa)	-	-
MGP_AKRJ_T0037317	-	2530	-	MGP_AKRJ_P0037317	684 (aa)	-	-
MGP_AKRJ_T0037316	-	1961	-	MGP_AKRJ_P0037316	191 (aa)	-	-
MGP_AKRJ_T0037320	-	975	-	-	- (aa)	-	-
MGP_AKRJ_T0037321	-	2579	-	MGP_AKRJ_P0037321	592 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0020602	Ercc6l2	81	30.021	MGP_AKRJ_G0027570	Chd1l	50	32.657
MGP_AKRJ_G0020602	Ercc6l2	82	30.353	MGP_AKRJ_G0035587	Smarca1	71	30.490