EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AKRJ_G0022025 (Gene tree)
Gene ID
-
Gene Symbol
Apobec3
Alias
APOBEC3|Apobec|Arp3|BC003314|CEM15|Cem15|Gm20117|Rfv-3|Rfv3
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 3
Gene Type
protein_coding
Species
Mus_musculus_akrj
Status
putative
Strand
Plus strand
Length
22972 bases
Position
chr15:79573943-79596914
Accession
1933111
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AKRJ_P0041691APOBEC_NPF08210.112.6e-7912
MGP_AKRJ_P0041691APOBEC_NPF08210.112.6e-7922
MGP_AKRJ_P0041688APOBEC_NPF08210.113.3e-7912
MGP_AKRJ_P0041688APOBEC_NPF08210.113.3e-7922
MGP_AKRJ_P0041692APOBEC_NPF08210.113.3e-7912
MGP_AKRJ_P0041692APOBEC_NPF08210.113.3e-7922
MGP_AKRJ_P0041694APOBEC_NPF08210.113.7e-7912
MGP_AKRJ_P0041694APOBEC_NPF08210.113.7e-7922
MGP_AKRJ_P0041686APOBEC_NPF08210.112.6e-2611
MGP_AKRJ_P0041685APOBEC_NPF08210.117.7e-2611
MGP_AKRJ_P0041695APOBEC_NPF08210.118.7e-2411
MGP_AKRJ_P0041691APOBEC_CPF05240.147.7e-5412
MGP_AKRJ_P0041691APOBEC_CPF05240.147.7e-5422
MGP_AKRJ_P0041688APOBEC_CPF05240.141.2e-5312
MGP_AKRJ_P0041688APOBEC_CPF05240.141.2e-5322
MGP_AKRJ_P0041692APOBEC_CPF05240.141.3e-5312
MGP_AKRJ_P0041692APOBEC_CPF05240.141.3e-5322
MGP_AKRJ_P0041694APOBEC_CPF05240.141.5e-5312
MGP_AKRJ_P0041694APOBEC_CPF05240.141.5e-5322
MGP_AKRJ_P0041685APOBEC_CPF05240.144.4e-2811
MGP_AKRJ_P0041686APOBEC_CPF05240.145.2e-2811
MGP_AKRJ_P0041695APOBEC_CPF05240.141.7e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AKRJ_T0041696-731--- (aa)--
MGP_AKRJ_T0041695-648-MGP_AKRJ_P004169585 (aa)--
MGP_AKRJ_T0041694-1323-MGP_AKRJ_P0041694440 (aa)--
MGP_AKRJ_T0041698-720--- (aa)--
MGP_AKRJ_T0041688-2460-MGP_AKRJ_P0041688429 (aa)--
MGP_AKRJ_T0041689-699-MGP_AKRJ_P004168979 (aa)--
MGP_AKRJ_T0041691-1980-MGP_AKRJ_P0041691407 (aa)--
MGP_AKRJ_T0041690-1217-MGP_AKRJ_P004169046 (aa)--
MGP_AKRJ_T0041693-2246-MGP_AKRJ_P0041693392 (aa)--
MGP_AKRJ_T0041692-2780-MGP_AKRJ_P0041692430 (aa)--
MGP_AKRJ_T0041686-817-MGP_AKRJ_P0041686151 (aa)--
MGP_AKRJ_T0041687-607--- (aa)--
MGP_AKRJ_T0041697-2082--- (aa)--
MGP_AKRJ_T0041685-750XM_006521551MGP_AKRJ_P0041685166 (aa)XP_006521614Q99J72
Gene Model
Click here to download MGP_AKRJ_G0022025's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0022025's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AKRJ_G0022025Apobec39833.721MGP_AKRJ_G0023801Apobec27833.333
MGP_AKRJ_G0022025Apobec39642.169MGP_AKRJ_G0031126Aicda9139.344
MGP_AKRJ_G0022025Apobec38438.028MGP_AKRJ_G0031127Apobec17434.737

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