EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0022238 (Gene tree)
Gene ID: -
Gene Symbol: Ddx23
Alias: 3110082M05Rik|4921506D17Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 17496 bases
Position: chr15:99397563-99415058
Accession: 1921601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0042396	DEAD	PF00270.29	2.3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0042401	-	610	-	-	- (aa)	-	-
MGP_AKRJ_T0042400	-	321	-	MGP_AKRJ_P0042400	80 (aa)	-	-
MGP_AKRJ_T0042397	-	3093	-	-	- (aa)	-	-
MGP_AKRJ_T0042396	-	3174	XM_006521493	MGP_AKRJ_P0042396	819 (aa)	XP_006521556	D3Z0M9
MGP_AKRJ_T0042399	-	793	-	-	- (aa)	-	-
MGP_AKRJ_T0042398	-	3411	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0022238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0022238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0022238	Ddx23	54	40.757	MGP_AKRJ_G0034977	Ddx43	63	40.757
MGP_AKRJ_G0022238	Ddx23	52	35.417	MGP_AKRJ_G0016489	Ddx59	64	35.417
MGP_AKRJ_G0022238	Ddx23	52	40.139	MGP_AKRJ_G0020534	Ddx41	75	37.400
MGP_AKRJ_G0022238	Ddx23	53	38.063	MGP_AKRJ_G0016865	D1Pas1	63	38.063
MGP_AKRJ_G0022238	Ddx23	50	37.915	MGP_AKRJ_G0019250	Ddx5	81	36.389
MGP_AKRJ_G0022238	Ddx23	54	30.243	MGP_AKRJ_G0018800	Ddx52	70	30.222
MGP_AKRJ_G0022238	Ddx23	50	30.900	MGP_AKRJ_G0022614	Eif4a2	92	30.900
MGP_AKRJ_G0022238	Ddx23	51	39.110	MGP_AKRJ_G0022013	Ddx17	60	39.110