EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0024338 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc2
Alias: 3010002F02Rik|BC037178
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 63254 bases
Position: chr18:43209564-43272817
Accession: 2448561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0049559	R3H	PF01424.22	1.4e-10	1	1
MGP_AKRJ_P0049559	DEAD	PF00270.29	2.6e-09	1	1
MGP_AKRJ_P0049559	YTH	PF04146.15	1.3e-42	1	1
MGP_AKRJ_P0049559	HA2	PF04408.23	6.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0049562	-	404	-	-	- (aa)	-	-
MGP_AKRJ_T0049561	-	4302	-	MGP_AKRJ_P0049561	585 (aa)	-	-
MGP_AKRJ_T0049560	-	1312	-	-	- (aa)	-	-
MGP_AKRJ_T0049559	-	7212	-	MGP_AKRJ_P0049559	1445 (aa)	-	B2RR83

Gene Model

Click here to download MGP_AKRJ_G0024338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0024338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0024338	Ythdc2	88	36.015	MGP_AKRJ_G0027189	Dhx36	80	41.667
MGP_AKRJ_G0024338	Ythdc2	89	32.714	MGP_AKRJ_G0020867	Dhx29	55	46.491
MGP_AKRJ_G0024338	Ythdc2	70	35.392	MGP_AKRJ_G0035253	Dhx30	56	47.236
MGP_AKRJ_G0024338	Ythdc2	72	36.504	MGP_AKRJ_G0023986	Dhx57	56	50.800
MGP_AKRJ_G0024338	Ythdc2	69	31.785	MGP_AKRJ_G0029459	Dhx15	80	41.262
MGP_AKRJ_G0024338	Ythdc2	90	35.912	MGP_AKRJ_G0016544	Dhx9	56	47.685