EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0024540 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 106882 bases
Position: chr18:82348920-82455801
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	1	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	2	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	3	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	4	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	5	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	6	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	7	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	8	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	9	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	10	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	11	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	12	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	13	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	14	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	15	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	16	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	17	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	18	19
MGP_AKRJ_P0050170	zf-C2H2	PF00096.26	1.1e-110	19	19
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	1	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	2	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	3	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	4	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	5	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	6	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	7	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	8	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	9	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	10	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	11	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	12	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	13	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	14	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	15	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	16	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	17	18
MGP_AKRJ_P0050167	zf-C2H2	PF00096.26	5.8e-108	18	18
MGP_AKRJ_P0050173	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_AKRJ_P0050167	zf-met	PF12874.7	5.9e-06	1	4
MGP_AKRJ_P0050167	zf-met	PF12874.7	5.9e-06	2	4
MGP_AKRJ_P0050167	zf-met	PF12874.7	5.9e-06	3	4
MGP_AKRJ_P0050167	zf-met	PF12874.7	5.9e-06	4	4
MGP_AKRJ_P0050170	zf-met	PF12874.7	3.4e-05	1	4
MGP_AKRJ_P0050170	zf-met	PF12874.7	3.4e-05	2	4
MGP_AKRJ_P0050170	zf-met	PF12874.7	3.4e-05	3	4
MGP_AKRJ_P0050170	zf-met	PF12874.7	3.4e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0050172	-	665	-	-	- (aa)	-	-
MGP_AKRJ_T0050173	-	410	-	MGP_AKRJ_P0050173	65 (aa)	-	-
MGP_AKRJ_T0050170	-	6059	-	MGP_AKRJ_P0050170	1847 (aa)	-	-
MGP_AKRJ_T0050171	-	6170	-	MGP_AKRJ_P0050171	485 (aa)	-	-
MGP_AKRJ_T0050167	-	9626	XM_006526490	MGP_AKRJ_P0050167	1799 (aa)	XP_006526553	B2RR24
MGP_AKRJ_T0050169	-	3227	-	MGP_AKRJ_P0050169	42 (aa)	-	-
MGP_AKRJ_T0050168	-	9561	-	MGP_AKRJ_P0050168	1840 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0024540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0024540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0024540	Zfp236	69	41.121	MGP_AKRJ_G0033674	Zfp882	87	45.652
MGP_AKRJ_G0024540	Zfp236	69	50.000	MGP_AKRJ_G0033673	Zfp709	80	43.750
MGP_AKRJ_G0024540	Zfp236	68	46.667	MGP_AKRJ_G0031726	Zfp111	77	46.667
MGP_AKRJ_G0024540	Zfp236	70	43.411	MGP_AKRJ_G0031724	Zfp235	66	43.411
MGP_AKRJ_G0024540	Zfp236	65	40.141	MGP_AKRJ_G0031725	Zfp114	74	40.141
MGP_AKRJ_G0024540	Zfp236	68	39.806	MGP_AKRJ_G0031723	Zfp112	52	42.742
MGP_AKRJ_G0024540	Zfp236	65	43.119	MGP_AKRJ_G0031728	Zfp108	56	47.872
MGP_AKRJ_G0024540	Zfp236	77	48.913	MGP_AKRJ_G0031729	Zfp93	99	42.969
MGP_AKRJ_G0024540	Zfp236	74	42.857	MGP_AKRJ_G0032032	Zfp715	69	41.935
MGP_AKRJ_G0024540	Zfp236	59	41.748	MGP_AKRJ_G0018925	Zfp652	60	41.748
MGP_AKRJ_G0024540	Zfp236	77	40.157	MGP_AKRJ_G0018338	Zfp867	94	45.902
MGP_AKRJ_G0024540	Zfp236	66	45.455	MGP_AKRJ_G0031078	Zfp637	85	51.807
MGP_AKRJ_G0024540	Zfp236	79	44.545	MGP_AKRJ_G0026830	Zfp334	68	45.556
MGP_AKRJ_G0024540	Zfp236	80	43.902	MGP_AKRJ_G0020630	Zfp759	97	41.525
MGP_AKRJ_G0024540	Zfp236	69	44.643	MGP_AKRJ_G0031479	Zfp865	78	44.643
MGP_AKRJ_G0024540	Zfp236	69	42.647	MGP_AKRJ_G0031731	Zfp94	76	42.647
MGP_AKRJ_G0024540	Zfp236	62	44.068	MGP_AKRJ_G0031730	Zfp61	57	42.857
MGP_AKRJ_G0024540	Zfp236	58	42.177	MGP_AKRJ_G0032951	E430018J23Rik	58	42.177
MGP_AKRJ_G0024540	Zfp236	86	31.818	MGP_AKRJ_G0017109	Zbtb24	54	45.794
MGP_AKRJ_G0024540	Zfp236	53	30.734	MGP_AKRJ_G0031482	Zfp784	79	40.244
MGP_AKRJ_G0024540	Zfp236	60	45.283	MGP_AKRJ_G0020629	Rslcan18	70	45.283
MGP_AKRJ_G0024540	Zfp236	71	35.669	MGP_AKRJ_G0031179	Zfp384	68	38.655
MGP_AKRJ_G0024540	Zfp236	60	45.652	MGP_AKRJ_G0034050	Zfp1	67	45.652
MGP_AKRJ_G0024540	Zfp236	58	48.780	MGP_AKRJ_G0032947	Zfp768	53	45.536
MGP_AKRJ_G0024540	Zfp236	76	37.143	MGP_AKRJ_G0023188	Zscan10	99	37.143
MGP_AKRJ_G0024540	Zfp236	79	38.732	MGP_AKRJ_G0023182	Zfp945	79	40.000
MGP_AKRJ_G0024540	Zfp236	81	39.437	MGP_AKRJ_G0020646	Zfp748	94	41.905
MGP_AKRJ_G0024540	Zfp236	78	36.471	MGP_AKRJ_G0018288	Zfp672	96	41.096
MGP_AKRJ_G0024540	Zfp236	59	41.096	MGP_AKRJ_G0031471	Zfp628	61	42.500
MGP_AKRJ_G0024540	Zfp236	68	44.643	MGP_AKRJ_G0031480	-	66	44.643
MGP_AKRJ_G0024540	Zfp236	57	36.242	MGP_AKRJ_G0034133	Snai3	67	47.297
MGP_AKRJ_G0024540	Zfp236	81	44.304	MGP_AKRJ_G0030596	Repin1	99	41.667
MGP_AKRJ_G0024540	Zfp236	62	44.318	MGP_AKRJ_G0034385	Zfp872	94	40.800
MGP_AKRJ_G0024540	Zfp236	75	45.283	MGP_AKRJ_G0023165	Zfp51	75	45.283
MGP_AKRJ_G0024540	Zfp236	69	42.727	MGP_AKRJ_G0028960	Zbtb17	61	42.727
MGP_AKRJ_G0024540	Zfp236	77	43.860	MGP_AKRJ_G0030729	Prdm5	87	46.739
MGP_AKRJ_G0024540	Zfp236	81	53.333	MGP_AKRJ_G0026867	Sall4	73	53.333
MGP_AKRJ_G0024540	Zfp236	78	41.667	MGP_AKRJ_G0026868	Zfp64	70	42.500
MGP_AKRJ_G0024540	Zfp236	54	46.739	MGP_AKRJ_G0029753	Gfi1	100	46.739
MGP_AKRJ_G0024540	Zfp236	69	42.222	MGP_AKRJ_G0023163	Zfp677	78	42.222
MGP_AKRJ_G0024540	Zfp236	70	46.296	MGP_AKRJ_G0034323	Zfp26	70	47.273
MGP_AKRJ_G0024540	Zfp236	61	41.228	MGP_AKRJ_G0026402	Zfp661	69	42.857
MGP_AKRJ_G0024540	Zfp236	79	47.059	MGP_AKRJ_G0031900	Zfp420	99	47.059
MGP_AKRJ_G0024540	Zfp236	63	42.500	MGP_AKRJ_G0031761	Zfp574	95	41.304
MGP_AKRJ_G0024540	Zfp236	71	41.228	MGP_AKRJ_G0033823	Zfp423	94	41.228
MGP_AKRJ_G0024540	Zfp236	69	40.559	MGP_AKRJ_G0021954	Zfp251	79	40.559
MGP_AKRJ_G0024540	Zfp236	78	40.690	MGP_AKRJ_G0033892	Zfp319	87	40.690
MGP_AKRJ_G0024540	Zfp236	67	46.341	MGP_AKRJ_G0032029	Zfp141	65	46.341
MGP_AKRJ_G0024540	Zfp236	76	34.940	MGP_AKRJ_G0032974	Zfp646	90	34.940
MGP_AKRJ_G0024540	Zfp236	63	42.697	MGP_AKRJ_G0018193	Zfp454	75	42.982
MGP_AKRJ_G0024540	Zfp236	70	48.864	MGP_AKRJ_G0027051	Mynn	62	48.864
MGP_AKRJ_G0024540	Zfp236	66	38.824	MGP_AKRJ_G0016500	Zbtb41	61	38.824