EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0025277 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 1010771 bases
Position: chr2:3653412-4664182
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0052415	RRM_1	PF00076.22	2.5e-51	1	3
MGP_AKRJ_P0052415	RRM_1	PF00076.22	2.5e-51	2	3
MGP_AKRJ_P0052415	RRM_1	PF00076.22	2.5e-51	3	3
MGP_AKRJ_P0052418	RRM_1	PF00076.22	2.5e-51	1	3
MGP_AKRJ_P0052418	RRM_1	PF00076.22	2.5e-51	2	3
MGP_AKRJ_P0052418	RRM_1	PF00076.22	2.5e-51	3	3
MGP_AKRJ_P0052424	RRM_1	PF00076.22	2.6e-51	1	3
MGP_AKRJ_P0052424	RRM_1	PF00076.22	2.6e-51	2	3
MGP_AKRJ_P0052424	RRM_1	PF00076.22	2.6e-51	3	3
MGP_AKRJ_P0052425	RRM_1	PF00076.22	2.6e-51	1	3
MGP_AKRJ_P0052425	RRM_1	PF00076.22	2.6e-51	2	3
MGP_AKRJ_P0052425	RRM_1	PF00076.22	2.6e-51	3	3
MGP_AKRJ_P0052426	RRM_1	PF00076.22	2.7e-51	1	3
MGP_AKRJ_P0052426	RRM_1	PF00076.22	2.7e-51	2	3
MGP_AKRJ_P0052426	RRM_1	PF00076.22	2.7e-51	3	3
MGP_AKRJ_P0052421	RRM_1	PF00076.22	3.1e-51	1	3
MGP_AKRJ_P0052421	RRM_1	PF00076.22	3.1e-51	2	3
MGP_AKRJ_P0052421	RRM_1	PF00076.22	3.1e-51	3	3
MGP_AKRJ_P0052417	RRM_1	PF00076.22	3.3e-51	1	3
MGP_AKRJ_P0052417	RRM_1	PF00076.22	3.3e-51	2	3
MGP_AKRJ_P0052417	RRM_1	PF00076.22	3.3e-51	3	3
MGP_AKRJ_P0052419	RRM_1	PF00076.22	3.3e-51	1	3
MGP_AKRJ_P0052419	RRM_1	PF00076.22	3.3e-51	2	3
MGP_AKRJ_P0052419	RRM_1	PF00076.22	3.3e-51	3	3
MGP_AKRJ_P0052423	RRM_1	PF00076.22	3.4e-51	1	3
MGP_AKRJ_P0052423	RRM_1	PF00076.22	3.4e-51	2	3
MGP_AKRJ_P0052423	RRM_1	PF00076.22	3.4e-51	3	3
MGP_AKRJ_P0052422	RRM_1	PF00076.22	4.9e-39	1	3
MGP_AKRJ_P0052422	RRM_1	PF00076.22	4.9e-39	2	3
MGP_AKRJ_P0052422	RRM_1	PF00076.22	4.9e-39	3	3
MGP_AKRJ_P0052427	RRM_1	PF00076.22	5.9e-39	1	3
MGP_AKRJ_P0052427	RRM_1	PF00076.22	5.9e-39	2	3
MGP_AKRJ_P0052427	RRM_1	PF00076.22	5.9e-39	3	3
MGP_AKRJ_P0052416	RRM_1	PF00076.22	6.2e-39	1	3
MGP_AKRJ_P0052416	RRM_1	PF00076.22	6.2e-39	2	3
MGP_AKRJ_P0052416	RRM_1	PF00076.22	6.2e-39	3	3
MGP_AKRJ_P0052420	RRM_1	PF00076.22	6.6e-39	1	3
MGP_AKRJ_P0052420	RRM_1	PF00076.22	6.6e-39	2	3
MGP_AKRJ_P0052420	RRM_1	PF00076.22	6.6e-39	3	3
MGP_AKRJ_P0052434	RRM_1	PF00076.22	7.5e-19	1	1
MGP_AKRJ_P0052430	RRM_1	PF00076.22	2.4e-15	1	1
MGP_AKRJ_P0052437	RRM_1	PF00076.22	2.2e-14	1	1
MGP_AKRJ_P0052439	RRM_1	PF00076.22	1.1e-13	1	1
MGP_AKRJ_P0052440	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0052440	-	331	-	MGP_AKRJ_P0052440	46 (aa)	-	-
MGP_AKRJ_T0052428	-	1996	-	MGP_AKRJ_P0052428	443 (aa)	-	-
MGP_AKRJ_T0052429	-	1240	-	-	- (aa)	-	-
MGP_AKRJ_T0052426	-	2338	-	MGP_AKRJ_P0052426	490 (aa)	-	-
MGP_AKRJ_T0052427	-	2177	-	MGP_AKRJ_P0052427	460 (aa)	-	-
MGP_AKRJ_T0052424	-	1721	-	MGP_AKRJ_P0052424	488 (aa)	-	-
MGP_AKRJ_T0052425	-	2332	-	MGP_AKRJ_P0052425	488 (aa)	-	-
MGP_AKRJ_T0052422	-	2223	-	MGP_AKRJ_P0052422	440 (aa)	-	-
MGP_AKRJ_T0052423	-	2525	-	MGP_AKRJ_P0052423	520 (aa)	-	-
MGP_AKRJ_T0052420	-	3853	-	MGP_AKRJ_P0052420	472 (aa)	-	-
MGP_AKRJ_T0052421	-	3587	-	MGP_AKRJ_P0052421	508 (aa)	-	-
MGP_AKRJ_T0052417	-	8745	-	MGP_AKRJ_P0052417	526 (aa)	-	-
MGP_AKRJ_T0052416	-	8863	-	MGP_AKRJ_P0052416	478 (aa)	-	-
MGP_AKRJ_T0052415	-	7725	XM_006497333	MGP_AKRJ_P0052415	484 (aa)	XP_006497396	Q9Z0H4
MGP_AKRJ_T0052419	-	5471	-	MGP_AKRJ_P0052419	526 (aa)	-	-
MGP_AKRJ_T0052418	-	7498	-	MGP_AKRJ_P0052418	484 (aa)	-	-
MGP_AKRJ_T0052441	-	1972	-	-	- (aa)	-	-
MGP_AKRJ_T0052439	-	529	-	MGP_AKRJ_P0052439	159 (aa)	-	-
MGP_AKRJ_T0052438	-	4143	-	-	- (aa)	-	-
MGP_AKRJ_T0052435	-	4802	-	-	- (aa)	-	-
MGP_AKRJ_T0052434	-	630	-	MGP_AKRJ_P0052434	134 (aa)	-	-
MGP_AKRJ_T0052437	-	402	-	MGP_AKRJ_P0052437	92 (aa)	-	-
MGP_AKRJ_T0052436	-	2075	-	-	- (aa)	-	-
MGP_AKRJ_T0052431	-	4798	-	-	- (aa)	-	-
MGP_AKRJ_T0052430	-	1024	-	MGP_AKRJ_P0052430	276 (aa)	-	-
MGP_AKRJ_T0052433	-	923	-	-	- (aa)	-	-
MGP_AKRJ_T0052432	-	405	-	-	- (aa)	-	-
MGP_AKRJ_T0052442	-	769	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0025277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0025277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0025277	Celf2	100	88.060	MGP_AKRJ_G0026079	Celf1	100	80.082
MGP_AKRJ_G0025277	Celf2	57	34.884	MGP_AKRJ_G0026771	Pabpc1l	53	34.884
MGP_AKRJ_G0025277	Celf2	88	33.333	MGP_AKRJ_G0033715	-	52	30.000
MGP_AKRJ_G0025277	Celf2	61	38.272	MGP_AKRJ_G0028486	Elavl4	81	38.272
MGP_AKRJ_G0025277	Celf2	51	35.443	MGP_AKRJ_G0030872	Tia1	83	35.443
MGP_AKRJ_G0025277	Celf2	92	53.659	MGP_AKRJ_G0017499	Celf5	93	59.770
MGP_AKRJ_G0025277	Celf2	90	55.556	MGP_AKRJ_G0024143	Celf4	100	41.787
MGP_AKRJ_G0025277	Celf2	82	33.333	MGP_AKRJ_G0017425	Cirbp	80	32.558
MGP_AKRJ_G0025277	Celf2	77	39.474	MGP_AKRJ_G0035314	Rbms3	75	37.079
MGP_AKRJ_G0025277	Celf2	77	39.474	MGP_AKRJ_G0017787	Rbms2	51	39.474
MGP_AKRJ_G0025277	Celf2	61	34.177	MGP_AKRJ_G0032997	Tial1	65	31.481
MGP_AKRJ_G0025277	Celf2	88	32.099	MGP_AKRJ_G0035651	Rbmx	78	30.000
MGP_AKRJ_G0025277	Celf2	94	83.333	MGP_AKRJ_G0027480	Celf3	99	45.783
MGP_AKRJ_G0025277	Celf2	82	34.667	MGP_AKRJ_G0034378	Elavl3	73	40.741
MGP_AKRJ_G0025277	Celf2	79	80.952	MGP_AKRJ_G0034812	Celf6	91	45.567
MGP_AKRJ_G0025277	Celf2	57	35.714	MGP_AKRJ_G0021736	Pabpc1	51	34.884
MGP_AKRJ_G0025277	Celf2	61	35.714	MGP_AKRJ_G0015974	Boll	57	32.000
MGP_AKRJ_G0025277	Celf2	57	34.211	MGP_AKRJ_G0023071	Pabpc6	51	34.211
MGP_AKRJ_G0025277	Celf2	87	33.333	MGP_AKRJ_G0028355	Elavl2	83	39.506
MGP_AKRJ_G0025277	Celf2	59	37.500	MGP_AKRJ_G0028651	Pabpc4	68	31.944
MGP_AKRJ_G0025277	Celf2	64	43.210	MGP_AKRJ_G0033245	Elavl1	81	43.210