EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0025710 (Gene tree)
Gene ID: -
Gene Symbol: Rbms1
Alias: 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|Mssp|Mssp1|YC1
Full Name: RNA binding motif%2C single stranded interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 220728 bases
Position: chr2:59628749-59849476
Accession: 1861774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0054917	RRM_1	PF00076.22	1.4e-32	1	2
MGP_AKRJ_P0054917	RRM_1	PF00076.22	1.4e-32	2	2
MGP_AKRJ_P0054915	RRM_1	PF00076.22	1.7e-32	1	2
MGP_AKRJ_P0054915	RRM_1	PF00076.22	1.7e-32	2	2
MGP_AKRJ_P0054916	RRM_1	PF00076.22	1.8e-32	1	2
MGP_AKRJ_P0054916	RRM_1	PF00076.22	1.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0054918	-	644	-	-	- (aa)	-	-
MGP_AKRJ_T0054919	-	757	-	-	- (aa)	-	-
MGP_AKRJ_T0054923	-	123	-	-	- (aa)	-	-
MGP_AKRJ_T0054922	-	202	-	-	- (aa)	-	-
MGP_AKRJ_T0054921	-	217	-	-	- (aa)	-	-
MGP_AKRJ_T0054920	-	224	-	-	- (aa)	-	-
MGP_AKRJ_T0054915	-	4436	XM_006499940	MGP_AKRJ_P0054915	403 (aa)	XP_006500003	Q91W59
MGP_AKRJ_T0054916	-	2543	-	MGP_AKRJ_P0054916	417 (aa)	-	-
MGP_AKRJ_T0054917	-	1806	-	MGP_AKRJ_P0054917	386 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0025710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0025710	Rbms1	96	71.538	MGP_AKRJ_G0035314	Rbms3	99	80.841
MGP_AKRJ_G0025710	Rbms1	99	66.753	MGP_AKRJ_G0017787	Rbms2	86	71.758
MGP_AKRJ_G0025710	Rbms1	51	37.209	MGP_AKRJ_G0028355	Elavl2	60	41.558
MGP_AKRJ_G0025710	Rbms1	53	32.773	MGP_AKRJ_G0028486	Elavl4	70	36.458
MGP_AKRJ_G0025710	Rbms1	51	33.645	MGP_AKRJ_G0034378	Elavl3	50	36.207