EuRBPDB

Description

Ensembl ID: MGP_AKRJ_G0026079 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 80413 bases
Position: chr2:91000051-91080463
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0055994	RRM_1	PF00076.22	4.1e-52	1	3
MGP_AKRJ_P0055994	RRM_1	PF00076.22	4.1e-52	2	3
MGP_AKRJ_P0055994	RRM_1	PF00076.22	4.1e-52	3	3
MGP_AKRJ_P0055988	RRM_1	PF00076.22	4.2e-52	1	3
MGP_AKRJ_P0055988	RRM_1	PF00076.22	4.2e-52	2	3
MGP_AKRJ_P0055988	RRM_1	PF00076.22	4.2e-52	3	3
MGP_AKRJ_P0055993	RRM_1	PF00076.22	5.2e-52	1	3
MGP_AKRJ_P0055993	RRM_1	PF00076.22	5.2e-52	2	3
MGP_AKRJ_P0055993	RRM_1	PF00076.22	5.2e-52	3	3
MGP_AKRJ_P0055991	RRM_1	PF00076.22	6.7e-52	1	3
MGP_AKRJ_P0055991	RRM_1	PF00076.22	6.7e-52	2	3
MGP_AKRJ_P0055991	RRM_1	PF00076.22	6.7e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0055993	-	7579	-	MGP_AKRJ_P0055993	513 (aa)	-	-
MGP_AKRJ_T0055992	-	271	-	-	- (aa)	-	-
MGP_AKRJ_T0055991	-	6224	-	MGP_AKRJ_P0055991	543 (aa)	-	-
MGP_AKRJ_T0055987	-	350	-	-	- (aa)	-	-
MGP_AKRJ_T0055995	-	482	-	-	- (aa)	-	-
MGP_AKRJ_T0055994	-	4432	-	MGP_AKRJ_P0055994	483 (aa)	-	-
MGP_AKRJ_T0055988	-	7851	-	MGP_AKRJ_P0055988	487 (aa)	-	-
MGP_AKRJ_T0055989	-	426	-	-	- (aa)	-	-
MGP_AKRJ_T0055990	-	478	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0026079	Celf1	69	41.975	MGP_AKRJ_G0028355	Elavl2	85	41.975
MGP_AKRJ_G0026079	Celf1	97	43.320	MGP_AKRJ_G0027480	Celf3	99	43.830
MGP_AKRJ_G0026079	Celf1	100	45.200	MGP_AKRJ_G0024143	Celf4	100	42.430
MGP_AKRJ_G0026079	Celf1	61	45.679	MGP_AKRJ_G0033245	Elavl1	83	45.679
MGP_AKRJ_G0026079	Celf1	62	40.741	MGP_AKRJ_G0028486	Elavl4	78	40.741
MGP_AKRJ_G0026079	Celf1	57	37.879	MGP_AKRJ_G0027119	Pabpc4l	65	34.211
MGP_AKRJ_G0026079	Celf1	70	38.636	MGP_AKRJ_G0028651	Pabpc4	68	33.333
MGP_AKRJ_G0026079	Celf1	53	43.421	MGP_AKRJ_G0035314	Rbms3	68	43.421
MGP_AKRJ_G0026079	Celf1	52	35.526	MGP_AKRJ_G0023071	Pabpc6	53	35.526
MGP_AKRJ_G0026079	Celf1	100	80.082	MGP_AKRJ_G0025277	Celf2	100	88.060
MGP_AKRJ_G0026079	Celf1	98	45.135	MGP_AKRJ_G0034812	Celf6	91	45.549
MGP_AKRJ_G0026079	Celf1	57	43.590	MGP_AKRJ_G0034378	Elavl3	71	42.391
MGP_AKRJ_G0026079	Celf1	98	44.650	MGP_AKRJ_G0017499	Celf5	93	56.322