EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0026391 (Gene tree)
Gene ID: -
Gene Symbol: Snrnp200
Alias: A330064G03Rik|Ascc3l1|BC011390|HELIC2|Kiaa0788|U5-200-KD|U5-200KD
Full Name: small nuclear ribonucleoprotein 200 (U5)
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 33003 bases
Position: chr2:128766437-128799439
Accession: 2444401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0057448	ResIII	PF04851.15	3.1e-25	1	2
MGP_AKRJ_P0057448	ResIII	PF04851.15	3.1e-25	2	2
MGP_AKRJ_P0057448	DEAD	PF00270.29	4.1e-52	1	2
MGP_AKRJ_P0057448	DEAD	PF00270.29	4.1e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0057450	-	6976	-	MGP_AKRJ_P0057450	2224 (aa)	-	-
MGP_AKRJ_T0057451	-	593	-	-	- (aa)	-	-
MGP_AKRJ_T0057452	-	722	-	-	- (aa)	-	-
MGP_AKRJ_T0057453	-	741	-	-	- (aa)	-	-
MGP_AKRJ_T0057449	-	6904	-	MGP_AKRJ_P0057449	2200 (aa)	-	-
MGP_AKRJ_T0057448	-	6745	-	MGP_AKRJ_P0057448	2136 (aa)	-	-
MGP_AKRJ_T0057447	-	2923	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0026391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0026391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0026391	Snrnp200	87	44.373	MGP_AKRJ_G0017147	Ascc3	81	47.798