EuRBPDB

Description

Ensembl ID: MGP_AKRJ_G0026697 (Gene tree)
Gene ID: -
Gene Symbol: Rbm39
Alias: 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|Caper|Caper alpha|R75070|Rnpc2|caper
Full Name: RNA binding motif protein 39
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 33634 bases
Position: chr2:159105112-159138745
Accession: 2157953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0058691	RRM_1	PF00076.22	1.2e-41	1	2
MGP_AKRJ_P0058691	RRM_1	PF00076.22	1.2e-41	2	2
MGP_AKRJ_P0058692	RRM_1	PF00076.22	1.7e-41	1	2
MGP_AKRJ_P0058692	RRM_1	PF00076.22	1.7e-41	2	2
MGP_AKRJ_P0058694	RRM_1	PF00076.22	1.7e-41	1	2
MGP_AKRJ_P0058694	RRM_1	PF00076.22	1.7e-41	2	2
MGP_AKRJ_P0058697	RRM_1	PF00076.22	2.2e-22	1	1
MGP_AKRJ_P0058698	RRM_1	PF00076.22	9.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0058699	-	695	-	-	- (aa)	-	-
MGP_AKRJ_T0058698	-	1090	-	MGP_AKRJ_P0058698	273 (aa)	-	-
MGP_AKRJ_T0058693	-	2744	-	MGP_AKRJ_P0058693	415 (aa)	-	-
MGP_AKRJ_T0058692	-	2580	-	MGP_AKRJ_P0058692	524 (aa)	-	-
MGP_AKRJ_T0058691	-	2810	XM_006498832	MGP_AKRJ_P0058691	530 (aa)	XP_006498895	Q8VH51
MGP_AKRJ_T0058697	-	931	-	MGP_AKRJ_P0058697	310 (aa)	-	-
MGP_AKRJ_T0058696	-	2127	-	MGP_AKRJ_P0058696	47 (aa)	-	-
MGP_AKRJ_T0058695	-	2120	-	MGP_AKRJ_P0058695	40 (aa)	-	-
MGP_AKRJ_T0058694	-	2711	-	MGP_AKRJ_P0058694	524 (aa)	-	-
MGP_AKRJ_T0058714	-	1008	-	-	- (aa)	-	-
MGP_AKRJ_T0058715	-	715	-	-	- (aa)	-	-
MGP_AKRJ_T0058712	-	672	-	-	- (aa)	-	-
MGP_AKRJ_T0058713	-	699	-	MGP_AKRJ_P0058713	40 (aa)	-	-
MGP_AKRJ_T0058710	-	743	-	MGP_AKRJ_P0058710	40 (aa)	-	-
MGP_AKRJ_T0058711	-	667	-	MGP_AKRJ_P0058711	38 (aa)	-	-
MGP_AKRJ_T0058709	-	585	-	MGP_AKRJ_P0058709	62 (aa)	-	-
MGP_AKRJ_T0058708	-	707	-	-	- (aa)	-	-
MGP_AKRJ_T0058705	-	685	-	-	- (aa)	-	-
MGP_AKRJ_T0058704	-	711	-	-	- (aa)	-	-
MGP_AKRJ_T0058707	-	593	-	MGP_AKRJ_P0058707	39 (aa)	-	-
MGP_AKRJ_T0058706	-	707	-	MGP_AKRJ_P0058706	40 (aa)	-	-
MGP_AKRJ_T0058701	-	1456	-	-	- (aa)	-	-
MGP_AKRJ_T0058700	-	546	-	-	- (aa)	-	-
MGP_AKRJ_T0058703	-	497	-	-	- (aa)	-	-
MGP_AKRJ_T0058702	-	754	-	MGP_AKRJ_P0058702	156 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0026697	Rbm39	52	34.483	MGP_AKRJ_G0017431	Dazap1	94	34.483