EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0026844 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 22725 bases
Position: chr2:170547395-170570119
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0059353	ResIII	PF04851.15	1.6e-06	1	1
MGP_AKRJ_P0059353	DEAD	PF00270.29	7.2e-45	1	1
MGP_AKRJ_P0059354	DEAD	PF00270.29	2.4e-18	1	1
MGP_AKRJ_P0059355	DEAD	PF00270.29	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0059358	-	708	-	-	- (aa)	-	-
MGP_AKRJ_T0059355	-	955	-	MGP_AKRJ_P0059355	310 (aa)	-	-
MGP_AKRJ_T0059354	-	2151	-	MGP_AKRJ_P0059354	292 (aa)	-	-
MGP_AKRJ_T0059357	-	649	-	-	- (aa)	-	-
MGP_AKRJ_T0059356	-	264	-	-	- (aa)	-	-
MGP_AKRJ_T0059353	-	2714	XM_006499422	MGP_AKRJ_P0059353	760 (aa)	XP_006499485	Q921N6

Gene Model

Click here to download MGP_AKRJ_G0026844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0026844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0026844	Ddx27	53	31.019	MGP_AKRJ_G0017955	Ddx56	98	33.065
MGP_AKRJ_G0026844	Ddx27	54	31.655	MGP_AKRJ_G0023561	Ddx39b	84	32.970
MGP_AKRJ_G0026844	Ddx27	53	38.221	MGP_AKRJ_G0016360	Ddx18	61	38.462
MGP_AKRJ_G0026844	Ddx27	51	35.938	MGP_AKRJ_G0019981	Ddx24	56	35.938
MGP_AKRJ_G0026844	Ddx27	59	33.696	MGP_AKRJ_G0033607	Ddx49	97	37.500
MGP_AKRJ_G0026844	Ddx27	56	32.558	MGP_AKRJ_G0022013	Ddx17	56	33.880