EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0027480 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 13873 bases
Position: chr3:94260874-94274746
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0062182	RRM_1	PF00076.22	9.3e-54	1	3
MGP_AKRJ_P0062182	RRM_1	PF00076.22	9.3e-54	2	3
MGP_AKRJ_P0062182	RRM_1	PF00076.22	9.3e-54	3	3
MGP_AKRJ_P0062181	RRM_1	PF00076.22	1.5e-53	1	3
MGP_AKRJ_P0062181	RRM_1	PF00076.22	1.5e-53	2	3
MGP_AKRJ_P0062181	RRM_1	PF00076.22	1.5e-53	3	3
MGP_AKRJ_P0062183	RRM_1	PF00076.22	2e-53	1	3
MGP_AKRJ_P0062183	RRM_1	PF00076.22	2e-53	2	3
MGP_AKRJ_P0062183	RRM_1	PF00076.22	2e-53	3	3
MGP_AKRJ_P0062188	RRM_1	PF00076.22	6.9e-16	1	1
MGP_AKRJ_P0062189	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0062191	-	889	-	-	- (aa)	-	-
MGP_AKRJ_T0062190	-	3372	-	-	- (aa)	-	-
MGP_AKRJ_T0062192	-	855	-	-	- (aa)	-	-
MGP_AKRJ_T0062188	-	779	-	MGP_AKRJ_P0062188	182 (aa)	-	-
MGP_AKRJ_T0062189	-	726	-	MGP_AKRJ_P0062189	231 (aa)	-	-
MGP_AKRJ_T0062186	-	2444	-	-	- (aa)	-	-
MGP_AKRJ_T0062187	-	2935	-	-	- (aa)	-	-
MGP_AKRJ_T0062184	-	1193	-	-	- (aa)	-	-
MGP_AKRJ_T0062185	-	669	-	-	- (aa)	-	-
MGP_AKRJ_T0062182	-	2354	-	MGP_AKRJ_P0062182	416 (aa)	-	-
MGP_AKRJ_T0062183	-	1485	-	MGP_AKRJ_P0062183	494 (aa)	-	-
MGP_AKRJ_T0062180	-	365	XM_006502323	MGP_AKRJ_P0062180	31 (aa)	XP_006502386	Q8CIN6
MGP_AKRJ_T0062181	-	2747	-	MGP_AKRJ_P0062181	465 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0027480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0027480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0027480	Celf3	67	32.857	MGP_AKRJ_G0026771	Pabpc1l	57	34.118
MGP_AKRJ_G0027480	Celf3	100	66.848	MGP_AKRJ_G0017499	Celf5	93	76.744
MGP_AKRJ_G0027480	Celf3	99	45.783	MGP_AKRJ_G0025277	Celf2	94	83.333
MGP_AKRJ_G0027480	Celf3	100	69.072	MGP_AKRJ_G0024143	Celf4	100	63.275
MGP_AKRJ_G0027480	Celf3	63	41.975	MGP_AKRJ_G0028355	Elavl2	76	41.975
MGP_AKRJ_G0027480	Celf3	98	35.632	MGP_AKRJ_G0034378	Elavl3	89	34.940
MGP_AKRJ_G0027480	Celf3	94	40.278	MGP_AKRJ_G0035314	Rbms3	81	39.474
MGP_AKRJ_G0027480	Celf3	99	43.830	MGP_AKRJ_G0026079	Celf1	97	43.320
MGP_AKRJ_G0027480	Celf3	76	38.462	MGP_AKRJ_G0030872	Tia1	93	38.667
MGP_AKRJ_G0027480	Celf3	61	40.741	MGP_AKRJ_G0028486	Elavl4	85	40.741
MGP_AKRJ_G0027480	Celf3	81	87.368	MGP_AKRJ_G0034812	Celf6	75	85.526
MGP_AKRJ_G0027480	Celf3	69	33.784	MGP_AKRJ_G0028651	Pabpc4	67	32.394
MGP_AKRJ_G0027480	Celf3	70	34.091	MGP_AKRJ_G0032997	Tial1	81	37.333
MGP_AKRJ_G0027480	Celf3	98	35.632	MGP_AKRJ_G0033245	Elavl1	95	44.444
MGP_AKRJ_G0027480	Celf3	80	37.500	MGP_AKRJ_G0023071	Pabpc6	72	36.585