EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0027553 (Gene tree)
Gene ID: -
Gene Symbol: Rbm8a
Alias: 2310057C03Rik|AA673428|Rbm8
Full Name: RNA binding motif protein 8a
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 3860 bases
Position: chr3:96620825-96624684
Accession: 1913129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0062544	RRM_1	PF00076.22	5.2e-18	1	1
MGP_AKRJ_P0062543	RRM_1	PF00076.22	5.6e-18	1	1
MGP_AKRJ_P0062545	RRM_1	PF00076.22	5.6e-18	1	1
MGP_AKRJ_P0062543	RRM_3	PF08777.11	3.7e-06	1	1
MGP_AKRJ_P0062545	RRM_3	PF08777.11	3.8e-06	1	1
MGP_AKRJ_P0062544	RRM_3	PF08777.11	8.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0062546	-	464	-	-	- (aa)	-	-
MGP_AKRJ_T0062547	-	560	-	-	- (aa)	-	-
MGP_AKRJ_T0062544	-	2757	-	MGP_AKRJ_P0062544	171 (aa)	-	-
MGP_AKRJ_T0062545	-	2583	-	MGP_AKRJ_P0062545	174 (aa)	-	-
MGP_AKRJ_T0062543	-	2608	-	MGP_AKRJ_P0062543	173 (aa)	-	Q9CWZ3

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0027553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0027553	Rbm8a	58	32.353	MGP_AKRJ_G0028355	Elavl2	59	33.784
MGP_AKRJ_G0027553	Rbm8a	62	32.000	MGP_AKRJ_G0033245	Elavl1	74	32.000
MGP_AKRJ_G0027553	Rbm8a	54	35.870	MGP_AKRJ_G0030872	Tia1	77	35.870
MGP_AKRJ_G0027553	Rbm8a	100	97.701	MGP_AKRJ_G0016789	Rbm8a2	100	97.701
MGP_AKRJ_G0027553	Rbm8a	62	30.693	MGP_AKRJ_G0028486	Elavl4	54	33.784
MGP_AKRJ_G0027553	Rbm8a	57	31.313	MGP_AKRJ_G0035651	Rbmx	73	32.000