EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0027750 (Gene tree)
Gene ID: -
Gene Symbol: Ptbp2
Alias: Brptb|Nptb|Ptb2|brPTB|nPTB
Full Name: polypyrimidine tract binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 67315 bases
Position: chr3:120794583-120861897
Accession: 1860489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0063411	RRM_5	PF13893.6	3.4e-53	1	3
MGP_AKRJ_P0063411	RRM_5	PF13893.6	3.4e-53	2	3
MGP_AKRJ_P0063411	RRM_5	PF13893.6	3.4e-53	3	3
MGP_AKRJ_P0063412	RRM_5	PF13893.6	4e-52	1	2
MGP_AKRJ_P0063412	RRM_5	PF13893.6	4e-52	2	2
MGP_AKRJ_P0063417	RRM_5	PF13893.6	3.4e-20	1	1
MGP_AKRJ_P0063412	RRM_1	PF00076.22	5.9e-33	1	3
MGP_AKRJ_P0063412	RRM_1	PF00076.22	5.9e-33	2	3
MGP_AKRJ_P0063412	RRM_1	PF00076.22	5.9e-33	3	3
MGP_AKRJ_P0063411	RRM_1	PF00076.22	2e-32	1	3
MGP_AKRJ_P0063411	RRM_1	PF00076.22	2e-32	2	3
MGP_AKRJ_P0063411	RRM_1	PF00076.22	2e-32	3	3
MGP_AKRJ_P0063419	RRM_1	PF00076.22	2.5e-10	1	1
MGP_AKRJ_P0063417	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0063419	-	1742	-	MGP_AKRJ_P0063419	241 (aa)	-	-
MGP_AKRJ_T0063418	-	4047	-	-	- (aa)	-	-
MGP_AKRJ_T0063422	-	454	-	-	- (aa)	-	-
MGP_AKRJ_T0063423	-	389	-	MGP_AKRJ_P0063423	49 (aa)	-	-
MGP_AKRJ_T0063420	-	654	-	-	- (aa)	-	-
MGP_AKRJ_T0063421	-	478	-	-	- (aa)	-	-
MGP_AKRJ_T0063413	-	1598	-	MGP_AKRJ_P0063413	356 (aa)	-	-
MGP_AKRJ_T0063412	-	3773	-	MGP_AKRJ_P0063412	531 (aa)	-	-
MGP_AKRJ_T0063411	-	3364	XM_006501731	MGP_AKRJ_P0063411	532 (aa)	XP_006501794	Q91Z31
MGP_AKRJ_T0063417	-	465	-	MGP_AKRJ_P0063417	155 (aa)	-	-
MGP_AKRJ_T0063416	-	491	-	-	- (aa)	-	-
MGP_AKRJ_T0063415	-	937	-	-	- (aa)	-	-
MGP_AKRJ_T0063414	-	576	-	MGP_AKRJ_P0063414	33 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0027750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0027750	Ptbp2	77	30.645	MGP_AKRJ_G0031872	Hnrnpl	77	30.645
MGP_AKRJ_G0027750	Ptbp2	100	72.903	MGP_AKRJ_G0017402	Ptbp1	100	73.048
MGP_AKRJ_G0027750	Ptbp2	99	69.835	MGP_AKRJ_G0028246	Ptbp3	91	78.195