EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0027913 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 26391 bases
Position: chr3:154362112-154388502
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0064292	KH_1	PF00013.29	7.1e-70	1	4
MGP_AKRJ_P0064292	KH_1	PF00013.29	7.1e-70	2	4
MGP_AKRJ_P0064292	KH_1	PF00013.29	7.1e-70	3	4
MGP_AKRJ_P0064292	KH_1	PF00013.29	7.1e-70	4	4
MGP_AKRJ_P0064289	KH_1	PF00013.29	2.2e-69	1	4
MGP_AKRJ_P0064289	KH_1	PF00013.29	2.2e-69	2	4
MGP_AKRJ_P0064289	KH_1	PF00013.29	2.2e-69	3	4
MGP_AKRJ_P0064289	KH_1	PF00013.29	2.2e-69	4	4
MGP_AKRJ_P0064295	KH_1	PF00013.29	2.2e-69	1	4
MGP_AKRJ_P0064295	KH_1	PF00013.29	2.2e-69	2	4
MGP_AKRJ_P0064295	KH_1	PF00013.29	2.2e-69	3	4
MGP_AKRJ_P0064295	KH_1	PF00013.29	2.2e-69	4	4
MGP_AKRJ_P0064293	KH_1	PF00013.29	2.4e-69	1	4
MGP_AKRJ_P0064293	KH_1	PF00013.29	2.4e-69	2	4
MGP_AKRJ_P0064293	KH_1	PF00013.29	2.4e-69	3	4
MGP_AKRJ_P0064293	KH_1	PF00013.29	2.4e-69	4	4
MGP_AKRJ_P0064291	KH_1	PF00013.29	2.4e-69	1	4
MGP_AKRJ_P0064291	KH_1	PF00013.29	2.4e-69	2	4
MGP_AKRJ_P0064291	KH_1	PF00013.29	2.4e-69	3	4
MGP_AKRJ_P0064291	KH_1	PF00013.29	2.4e-69	4	4
MGP_AKRJ_P0064290	KH_1	PF00013.29	7.6e-38	1	2
MGP_AKRJ_P0064290	KH_1	PF00013.29	7.6e-38	2	2
MGP_AKRJ_P0064299	KH_1	PF00013.29	1.1e-16	1	1
MGP_AKRJ_P0064292	KH_2	PF07650.17	1.3e-22	1	2
MGP_AKRJ_P0064292	KH_2	PF07650.17	1.3e-22	2	2
MGP_AKRJ_P0064295	KH_2	PF07650.17	3.3e-22	1	2
MGP_AKRJ_P0064295	KH_2	PF07650.17	3.3e-22	2	2
MGP_AKRJ_P0064293	KH_2	PF07650.17	3.6e-22	1	2
MGP_AKRJ_P0064293	KH_2	PF07650.17	3.6e-22	2	2
MGP_AKRJ_P0064291	KH_2	PF07650.17	3.6e-22	1	2
MGP_AKRJ_P0064291	KH_2	PF07650.17	3.6e-22	2	2
MGP_AKRJ_P0064289	KH_2	PF07650.17	3.7e-22	1	2
MGP_AKRJ_P0064289	KH_2	PF07650.17	3.7e-22	2	2
MGP_AKRJ_P0064290	KH_2	PF07650.17	3.8e-10	1	1
MGP_AKRJ_P0064299	KH_2	PF07650.17	5.2e-06	1	1
MGP_AKRJ_P0064303	DUF1897	PF09005.10	1.7e-12	1	2
MGP_AKRJ_P0064303	DUF1897	PF09005.10	1.7e-12	2	2
MGP_AKRJ_P0064301	DUF1897	PF09005.10	2.1e-12	1	2
MGP_AKRJ_P0064301	DUF1897	PF09005.10	2.1e-12	2	2
MGP_AKRJ_P0064289	DUF1897	PF09005.10	2.4e-11	1	2
MGP_AKRJ_P0064289	DUF1897	PF09005.10	2.4e-11	2	2
MGP_AKRJ_P0064295	DUF1897	PF09005.10	2.5e-11	1	2
MGP_AKRJ_P0064295	DUF1897	PF09005.10	2.5e-11	2	2
MGP_AKRJ_P0064293	DUF1897	PF09005.10	2.5e-11	1	2
MGP_AKRJ_P0064293	DUF1897	PF09005.10	2.5e-11	2	2
MGP_AKRJ_P0064291	DUF1897	PF09005.10	2.6e-11	1	2
MGP_AKRJ_P0064291	DUF1897	PF09005.10	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0064289	-	6521	XM_006501660	MGP_AKRJ_P0064289	642 (aa)	XP_006501723	Q91WJ8
MGP_AKRJ_T0064307	-	665	-	-	- (aa)	-	-
MGP_AKRJ_T0064306	-	4008	-	-	- (aa)	-	-
MGP_AKRJ_T0064290	-	1040	-	MGP_AKRJ_P0064290	306 (aa)	-	-
MGP_AKRJ_T0064291	-	2552	-	MGP_AKRJ_P0064291	654 (aa)	-	-
MGP_AKRJ_T0064292	-	3163	-	MGP_AKRJ_P0064292	523 (aa)	-	-
MGP_AKRJ_T0064293	-	2526	-	MGP_AKRJ_P0064293	651 (aa)	-	-
MGP_AKRJ_T0064294	-	2093	-	MGP_AKRJ_P0064294	69 (aa)	-	-
MGP_AKRJ_T0064295	-	2374	-	MGP_AKRJ_P0064295	643 (aa)	-	-
MGP_AKRJ_T0064296	-	4846	-	MGP_AKRJ_P0064296	700 (aa)	-	-
MGP_AKRJ_T0064297	-	4525	-	MGP_AKRJ_P0064297	642 (aa)	-	-
MGP_AKRJ_T0064298	-	432	-	-	- (aa)	-	-
MGP_AKRJ_T0064299	-	585	-	MGP_AKRJ_P0064299	149 (aa)	-	-
MGP_AKRJ_T0064304	-	5099	-	-	- (aa)	-	-
MGP_AKRJ_T0064305	-	424	-	-	- (aa)	-	-
MGP_AKRJ_T0064302	-	800	-	MGP_AKRJ_P0064302	173 (aa)	-	-
MGP_AKRJ_T0064303	-	807	-	MGP_AKRJ_P0064303	156 (aa)	-	-
MGP_AKRJ_T0064300	-	512	-	-	- (aa)	-	-
MGP_AKRJ_T0064301	-	796	-	MGP_AKRJ_P0064301	141 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0027913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0027913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0027913	Fubp1	72	34.524	MGP_AKRJ_G0035143	-	76	33.684
MGP_AKRJ_G0027913	Fubp1	61	36.765	MGP_AKRJ_G0031651	Nova2	54	36.765
MGP_AKRJ_G0027913	Fubp1	61	36.765	MGP_AKRJ_G0031650	Nova2	53	36.765
MGP_AKRJ_G0027913	Fubp1	96	64.410	MGP_AKRJ_G0023876	Khsrp	70	67.654
MGP_AKRJ_G0027913	Fubp1	72	33.019	MGP_AKRJ_G0017328	Pcbp3	66	31.250
MGP_AKRJ_G0027913	Fubp1	53	34.615	MGP_AKRJ_G0020565	Hnrnpk	57	34.615
MGP_AKRJ_G0027913	Fubp1	94	59.208	MGP_AKRJ_G0025533	Fubp3	96	64.324
MGP_AKRJ_G0027913	Fubp1	50	36.364	MGP_AKRJ_G0019649	Nova1	57	36.364