EuRBPDB

Description

Ensembl ID: MGP_AKRJ_G0027964 (Gene tree)
Gene ID: -
Gene Symbol: Chd7
Alias: A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 180512 bases
Position: chr4:5207076-5387587
Accession: 2444748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0064604	ResIII	PF04851.15	4.5e-06	1	1
MGP_AKRJ_P0064605	ResIII	PF04851.15	4.5e-06	1	1
MGP_AKRJ_P0064604	BRK	PF07533.16	4.7e-37	1	2
MGP_AKRJ_P0064604	BRK	PF07533.16	4.7e-37	2	2
MGP_AKRJ_P0064605	BRK	PF07533.16	4.7e-37	1	2
MGP_AKRJ_P0064605	BRK	PF07533.16	4.7e-37	2	2
MGP_AKRJ_P0064607	BRK	PF07533.16	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0064603	-	2381	-	MGP_AKRJ_P0064603	631 (aa)	-	-
MGP_AKRJ_T0064602	-	4953	-	-	- (aa)	-	-
MGP_AKRJ_T0064607	-	3463	-	MGP_AKRJ_P0064607	941 (aa)	-	-
MGP_AKRJ_T0064606	-	458	-	MGP_AKRJ_P0064606	19 (aa)	-	-
MGP_AKRJ_T0064605	-	10216	-	MGP_AKRJ_P0064605	2986 (aa)	-	-
MGP_AKRJ_T0064604	-	9445	-	MGP_AKRJ_P0064604	2986 (aa)	-	-
MGP_AKRJ_T0064609	-	741	-	-	- (aa)	-	-
MGP_AKRJ_T0064608	-	9959	-	MGP_AKRJ_P0064608	2985 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0027964	Chd7	72	64.905	MGP_AKRJ_G0026747	Chd6	84	72.837
MGP_AKRJ_G0027964	Chd7	94	54.334	MGP_AKRJ_G0033836	Chd9	83	69.649