EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0028246 (Gene tree)
Gene ID: -
Gene Symbol: Ptbp3
Alias: 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1
Full Name: polypyrimidine tract binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 79986 bases
Position: chr4:57699150-57779135
Accession: 1923334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0065836	RRM_5	PF13893.6	1.1e-61	1	3
MGP_AKRJ_P0065836	RRM_5	PF13893.6	1.1e-61	2	3
MGP_AKRJ_P0065836	RRM_5	PF13893.6	1.1e-61	3	3
MGP_AKRJ_P0065835	RRM_5	PF13893.6	1.2e-61	1	3
MGP_AKRJ_P0065835	RRM_5	PF13893.6	1.2e-61	2	3
MGP_AKRJ_P0065835	RRM_5	PF13893.6	1.2e-61	3	3
MGP_AKRJ_P0065838	RRM_5	PF13893.6	1.3e-47	1	1
MGP_AKRJ_P0065841	RRM_5	PF13893.6	7.2e-06	1	1
MGP_AKRJ_P0065836	RRM_1	PF00076.22	2.1e-31	1	3
MGP_AKRJ_P0065836	RRM_1	PF00076.22	2.1e-31	2	3
MGP_AKRJ_P0065836	RRM_1	PF00076.22	2.1e-31	3	3
MGP_AKRJ_P0065835	RRM_1	PF00076.22	2.2e-31	1	3
MGP_AKRJ_P0065835	RRM_1	PF00076.22	2.2e-31	2	3
MGP_AKRJ_P0065835	RRM_1	PF00076.22	2.2e-31	3	3
MGP_AKRJ_P0065841	RRM_1	PF00076.22	2.8e-11	1	1
MGP_AKRJ_P0065838	RRM_1	PF00076.22	3.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0065839	-	1286	-	MGP_AKRJ_P0065839	45 (aa)	-	-
MGP_AKRJ_T0065838	-	566	-	MGP_AKRJ_P0065838	188 (aa)	-	-
MGP_AKRJ_T0065837	-	669	-	-	- (aa)	-	-
MGP_AKRJ_T0065836	-	3409	-	MGP_AKRJ_P0065836	551 (aa)	-	-
MGP_AKRJ_T0065835	-	6677	XM_006537851	MGP_AKRJ_P0065835	554 (aa)	XP_006537914	Q8BHD7
MGP_AKRJ_T0065842	-	447	-	-	- (aa)	-	-
MGP_AKRJ_T0065843	-	606	-	MGP_AKRJ_P0065843	104 (aa)	-	-
MGP_AKRJ_T0065840	-	558	-	MGP_AKRJ_P0065840	41 (aa)	-	-
MGP_AKRJ_T0065841	-	550	-	MGP_AKRJ_P0065841	146 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0028246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0028246	Ptbp3	83	35.537	MGP_AKRJ_G0031872	Hnrnpl	55	36.207
MGP_AKRJ_G0028246	Ptbp3	100	77.379	MGP_AKRJ_G0017402	Ptbp1	100	78.136
MGP_AKRJ_G0028246	Ptbp3	91	78.195	MGP_AKRJ_G0027750	Ptbp2	99	69.835