EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0028355 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 154169 bases
Position: chr4:90187285-90341453
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0066255	RRM_5	PF13893.6	1.3e-12	1	2
MGP_AKRJ_P0066255	RRM_5	PF13893.6	1.3e-12	2	2
MGP_AKRJ_P0066252	RRM_5	PF13893.6	1.4e-12	1	2
MGP_AKRJ_P0066252	RRM_5	PF13893.6	1.4e-12	2	2
MGP_AKRJ_P0066253	RRM_5	PF13893.6	1.7e-12	1	2
MGP_AKRJ_P0066253	RRM_5	PF13893.6	1.7e-12	2	2
MGP_AKRJ_P0066254	RRM_5	PF13893.6	1.9e-12	1	2
MGP_AKRJ_P0066254	RRM_5	PF13893.6	1.9e-12	2	2
MGP_AKRJ_P0066258	RRM_5	PF13893.6	2.1e-12	1	2
MGP_AKRJ_P0066258	RRM_5	PF13893.6	2.1e-12	2	2
MGP_AKRJ_P0066257	RRM_5	PF13893.6	2.2e-12	1	2
MGP_AKRJ_P0066257	RRM_5	PF13893.6	2.2e-12	2	2
MGP_AKRJ_P0066255	RRM_1	PF00076.22	1.2e-66	1	3
MGP_AKRJ_P0066255	RRM_1	PF00076.22	1.2e-66	2	3
MGP_AKRJ_P0066255	RRM_1	PF00076.22	1.2e-66	3	3
MGP_AKRJ_P0066252	RRM_1	PF00076.22	1.4e-66	1	3
MGP_AKRJ_P0066252	RRM_1	PF00076.22	1.4e-66	2	3
MGP_AKRJ_P0066252	RRM_1	PF00076.22	1.4e-66	3	3
MGP_AKRJ_P0066253	RRM_1	PF00076.22	1.6e-66	1	3
MGP_AKRJ_P0066253	RRM_1	PF00076.22	1.6e-66	2	3
MGP_AKRJ_P0066253	RRM_1	PF00076.22	1.6e-66	3	3
MGP_AKRJ_P0066254	RRM_1	PF00076.22	1.7e-66	1	3
MGP_AKRJ_P0066254	RRM_1	PF00076.22	1.7e-66	2	3
MGP_AKRJ_P0066254	RRM_1	PF00076.22	1.7e-66	3	3
MGP_AKRJ_P0066257	RRM_1	PF00076.22	2e-66	1	3
MGP_AKRJ_P0066257	RRM_1	PF00076.22	2e-66	2	3
MGP_AKRJ_P0066257	RRM_1	PF00076.22	2e-66	3	3
MGP_AKRJ_P0066258	RRM_1	PF00076.22	2e-66	1	3
MGP_AKRJ_P0066258	RRM_1	PF00076.22	2e-66	2	3
MGP_AKRJ_P0066258	RRM_1	PF00076.22	2e-66	3	3
MGP_AKRJ_P0066260	RRM_1	PF00076.22	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0066264	-	415	-	-	- (aa)	-	-
MGP_AKRJ_T0066256	-	930	-	-	- (aa)	-	-
MGP_AKRJ_T0066257	-	1167	-	MGP_AKRJ_P0066257	388 (aa)	-	-
MGP_AKRJ_T0066254	-	3797	-	MGP_AKRJ_P0066254	376 (aa)	-	-
MGP_AKRJ_T0066255	-	3671	-	MGP_AKRJ_P0066255	347 (aa)	-	-
MGP_AKRJ_T0066252	-	3730	XM_006502778	MGP_AKRJ_P0066252	360 (aa)	XP_006502841	Q60899
MGP_AKRJ_T0066253	-	3840	-	MGP_AKRJ_P0066253	373 (aa)	-	-
MGP_AKRJ_T0066263	-	450	-	-	- (aa)	-	-
MGP_AKRJ_T0066262	-	511	-	MGP_AKRJ_P0066262	23 (aa)	-	-
MGP_AKRJ_T0066261	-	408	-	MGP_AKRJ_P0066261	83 (aa)	-	-
MGP_AKRJ_T0066260	-	425	-	MGP_AKRJ_P0066260	125 (aa)	-	-
MGP_AKRJ_T0066258	-	1282	-	MGP_AKRJ_P0066258	389 (aa)	-	-
MGP_AKRJ_T0066259	-	3195	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0028355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0028355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0028355	Elavl2	100	89.751	MGP_AKRJ_G0028486	Elavl4	99	89.315
MGP_AKRJ_G0028355	Elavl2	76	41.975	MGP_AKRJ_G0027480	Celf3	63	41.975
MGP_AKRJ_G0028355	Elavl2	89	37.349	MGP_AKRJ_G0021736	Pabpc1	58	37.349
MGP_AKRJ_G0028355	Elavl2	100	79.292	MGP_AKRJ_G0034378	Elavl3	100	78.400
MGP_AKRJ_G0028355	Elavl2	64	37.500	MGP_AKRJ_G0017425	Cirbp	76	37.500
MGP_AKRJ_G0028355	Elavl2	96	34.615	MGP_AKRJ_G0030872	Tia1	89	34.615
MGP_AKRJ_G0028355	Elavl2	90	37.349	MGP_AKRJ_G0023071	Pabpc6	60	37.349
MGP_AKRJ_G0028355	Elavl2	89	36.145	MGP_AKRJ_G0024305	Pabpc2	59	36.145
MGP_AKRJ_G0028355	Elavl2	92	34.940	MGP_AKRJ_G0026771	Pabpc1l	64	34.940
MGP_AKRJ_G0028355	Elavl2	88	39.506	MGP_AKRJ_G0024143	Celf4	91	37.037
MGP_AKRJ_G0028355	Elavl2	83	39.506	MGP_AKRJ_G0025277	Celf2	87	33.333
MGP_AKRJ_G0028355	Elavl2	85	41.975	MGP_AKRJ_G0026079	Celf1	69	41.975
MGP_AKRJ_G0028355	Elavl2	60	41.558	MGP_AKRJ_G0025710	Rbms1	51	37.209
MGP_AKRJ_G0028355	Elavl2	78	40.741	MGP_AKRJ_G0034812	Celf6	89	37.037
MGP_AKRJ_G0028355	Elavl2	59	33.784	MGP_AKRJ_G0027553	Rbm8a	58	32.353
MGP_AKRJ_G0028355	Elavl2	63	32.911	MGP_AKRJ_G0035451	Rbm3	82	38.710
MGP_AKRJ_G0028355	Elavl2	67	35.714	MGP_AKRJ_G0029998	Snrnp35	60	37.500
MGP_AKRJ_G0028355	Elavl2	58	31.169	MGP_AKRJ_G0029692	Hnrnpd	70	32.000
MGP_AKRJ_G0028355	Elavl2	89	34.940	MGP_AKRJ_G0027119	Pabpc4l	96	34.940
MGP_AKRJ_G0028355	Elavl2	93	34.615	MGP_AKRJ_G0032997	Tial1	72	34.615
MGP_AKRJ_G0028355	Elavl2	69	34.524	MGP_AKRJ_G0033715	-	58	34.831
MGP_AKRJ_G0028355	Elavl2	89	76.375	MGP_AKRJ_G0033245	Elavl1	94	76.375
MGP_AKRJ_G0028355	Elavl2	89	37.037	MGP_AKRJ_G0035943	Pabpc5	94	37.037
MGP_AKRJ_G0028355	Elavl2	89	34.940	MGP_AKRJ_G0028651	Pabpc4	98	35.294
MGP_AKRJ_G0028355	Elavl2	97	30.857	MGP_AKRJ_G0017499	Celf5	97	30.857
MGP_AKRJ_G0028355	Elavl2	66	30.952	MGP_AKRJ_G0028780	Trnau1ap	98	30.952
MGP_AKRJ_G0028355	Elavl2	69	37.209	MGP_AKRJ_G0035314	Rbms3	83	37.222
MGP_AKRJ_G0028355	Elavl2	59	33.784	MGP_AKRJ_G0016789	Rbm8a2	58	32.353
MGP_AKRJ_G0028355	Elavl2	75	31.959	MGP_AKRJ_G0018862	Msi2	70	31.250
MGP_AKRJ_G0028355	Elavl2	73	34.831	MGP_AKRJ_G0035651	Rbmx	86	34.831