EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0028465 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc11
Alias: 6030404K05Rik|9230115F04Rik|Kiaa0191|PPAPD3|Tut4|mKIAA0191
Full Name: zinc finger%2C CCHC domain containing 11
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 103729 bases
Position: chr4:107886840-107990568
Accession: 2445126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0066789	zf-CCHC	PF00098.23	8e-11	1	2
MGP_AKRJ_P0066789	zf-CCHC	PF00098.23	8e-11	2	2
MGP_AKRJ_P0066790	zf-CCHC	PF00098.23	8.1e-11	1	2
MGP_AKRJ_P0066790	zf-CCHC	PF00098.23	8.1e-11	2	2
MGP_AKRJ_P0066789	PAP_assoc	PF03828.19	3.4e-28	1	2
MGP_AKRJ_P0066789	PAP_assoc	PF03828.19	3.4e-28	2	2
MGP_AKRJ_P0066790	PAP_assoc	PF03828.19	3.8e-28	1	2
MGP_AKRJ_P0066790	PAP_assoc	PF03828.19	3.8e-28	2	2
MGP_AKRJ_P0066791	PAP_assoc	PF03828.19	4.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0066798	-	587	-	MGP_AKRJ_P0066798	105 (aa)	-	-
MGP_AKRJ_T0066788	-	679	XM_006502978	MGP_AKRJ_P0066788	63 (aa)	XP_006503041	B2RX14
MGP_AKRJ_T0066789	-	6054	-	MGP_AKRJ_P0066789	1644 (aa)	-	-
MGP_AKRJ_T0066793	-	541	-	-	- (aa)	-	-
MGP_AKRJ_T0066792	-	636	-	-	- (aa)	-	-
MGP_AKRJ_T0066791	-	3283	-	MGP_AKRJ_P0066791	1006 (aa)	-	-
MGP_AKRJ_T0066790	-	5865	-	MGP_AKRJ_P0066790	1648 (aa)	-	-
MGP_AKRJ_T0066797	-	2472	-	-	- (aa)	-	-
MGP_AKRJ_T0066796	-	484	-	-	- (aa)	-	-
MGP_AKRJ_T0066795	-	591	-	-	- (aa)	-	-
MGP_AKRJ_T0066794	-	567	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0028465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0028465	Zcchc11	59	58.396	MGP_AKRJ_G0020576	Zcchc6	63	67.209