EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0028529 (Gene tree)
Gene ID: -
Gene Symbol: Rad54l
Alias: RAD54|Rad54
Full Name: RAD54 like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 31356 bases
Position: chr4:114899430-114930785
Accession: 894697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0067082	ResIII	PF04851.15	2.2e-09	1	1
MGP_AKRJ_P0067083	ResIII	PF04851.15	2.2e-09	1	1
MGP_AKRJ_P0067082	DEAD	PF00270.29	9e-07	1	1
MGP_AKRJ_P0067083	DEAD	PF00270.29	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0067084	-	654	-	-	- (aa)	-	-
MGP_AKRJ_T0067085	-	209	-	-	- (aa)	-	-
MGP_AKRJ_T0067086	-	1521	-	-	- (aa)	-	-
MGP_AKRJ_T0067081	-	4554	-	-	- (aa)	-	-
MGP_AKRJ_T0067082	-	2781	-	MGP_AKRJ_P0067082	747 (aa)	-	-
MGP_AKRJ_T0067083	-	3026	-	MGP_AKRJ_P0067083	747 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0028529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0028529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0028529	Rad54l	66	30.785	MGP_AKRJ_G0027570	Chd1l	50	30.584
MGP_AKRJ_G0028529	Rad54l	88	44.604	MGP_AKRJ_G0027977	Rad54b	76	44.604
MGP_AKRJ_G0028529	Rad54l	66	33.267	MGP_AKRJ_G0035587	Smarca1	61	32.031
MGP_AKRJ_G0028529	Rad54l	66	30.112	MGP_AKRJ_G0030724	Smarcad1	50	30.112