EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AKRJ_G0029042 (Gene tree)
Gene ID
-
Gene Symbol
Tardbp
Alias
1190002A23Rik|C85084|TARDBP|TDP-43|Tdp43
Full Name
TAR DNA binding protein
Gene Type
protein_coding
Species
Mus_musculus_akrj
Status
putative
Strand
Minus strand
Length
19221 bases
Position
chr4:150022141-150041361
Accession
2387629
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AKRJ_P0069258RRM_1PF00076.221.2e-2612
MGP_AKRJ_P0069258RRM_1PF00076.221.2e-2622
MGP_AKRJ_P0069251RRM_1PF00076.224.4e-2612
MGP_AKRJ_P0069251RRM_1PF00076.224.4e-2622
MGP_AKRJ_P0069236RRM_1PF00076.224.5e-2612
MGP_AKRJ_P0069236RRM_1PF00076.224.5e-2622
MGP_AKRJ_P0069255RRM_1PF00076.224.5e-2612
MGP_AKRJ_P0069255RRM_1PF00076.224.5e-2622
MGP_AKRJ_P0069233RRM_1PF00076.224.8e-2612
MGP_AKRJ_P0069233RRM_1PF00076.224.8e-2622
MGP_AKRJ_P0069256RRM_1PF00076.224.8e-2612
MGP_AKRJ_P0069256RRM_1PF00076.224.8e-2622
MGP_AKRJ_P0069234RRM_1PF00076.224.9e-2612
MGP_AKRJ_P0069234RRM_1PF00076.224.9e-2622
MGP_AKRJ_P0069257RRM_1PF00076.224.9e-2612
MGP_AKRJ_P0069257RRM_1PF00076.224.9e-2622
MGP_AKRJ_P0069235RRM_1PF00076.221.2e-2512
MGP_AKRJ_P0069235RRM_1PF00076.221.2e-2522
MGP_AKRJ_P0069260RRM_1PF00076.224e-1511
MGP_AKRJ_P0069261RRM_1PF00076.224.9e-1111
MGP_AKRJ_P0069252RRM_1PF00076.226.6e-0911
MGP_AKRJ_P0069254RRM_1PF00076.223e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AKRJ_T0069262-370--- (aa)--
MGP_AKRJ_T0069260-818-MGP_AKRJ_P0069260243 (aa)--
MGP_AKRJ_T0069261-740-MGP_AKRJ_P0069261149 (aa)--
MGP_AKRJ_T0069244-2006-MGP_AKRJ_P0069244298 (aa)--
MGP_AKRJ_T0069245-1011-MGP_AKRJ_P006924534 (aa)--
MGP_AKRJ_T0069246-741-MGP_AKRJ_P0069246175 (aa)--
MGP_AKRJ_T0069247-781-MGP_AKRJ_P0069247140 (aa)--
MGP_AKRJ_T0069240-676-MGP_AKRJ_P006924088 (aa)--
MGP_AKRJ_T0069241-908--- (aa)--
MGP_AKRJ_T0069242-609--- (aa)--
MGP_AKRJ_T0069243-358--- (aa)--
MGP_AKRJ_T0069248-1304-MGP_AKRJ_P0069248285 (aa)--
MGP_AKRJ_T0069249-684-MGP_AKRJ_P0069249137 (aa)--
MGP_AKRJ_T0069233-6257XM_011250237MGP_AKRJ_P0069233304 (aa)XP_011248539Q921F2
MGP_AKRJ_T0069235-7221-MGP_AKRJ_P0069235414 (aa)--
MGP_AKRJ_T0069234-6169-MGP_AKRJ_P0069234302 (aa)--
MGP_AKRJ_T0069237-1773-MGP_AKRJ_P0069237298 (aa)--
MGP_AKRJ_T0069236-6239-MGP_AKRJ_P0069236298 (aa)--
MGP_AKRJ_T0069239-529-MGP_AKRJ_P006923998 (aa)--
MGP_AKRJ_T0069238-731--- (aa)--
MGP_AKRJ_T0069253-661-MGP_AKRJ_P006925319 (aa)--
MGP_AKRJ_T0069252-479-MGP_AKRJ_P0069252128 (aa)--
MGP_AKRJ_T0069251-1661-MGP_AKRJ_P0069251295 (aa)--
MGP_AKRJ_T0069250-517-MGP_AKRJ_P006925077 (aa)--
MGP_AKRJ_T0069257-923-MGP_AKRJ_P0069257302 (aa)--
MGP_AKRJ_T0069256-1011-MGP_AKRJ_P0069256304 (aa)--
MGP_AKRJ_T0069255-1096-MGP_AKRJ_P0069255298 (aa)--
MGP_AKRJ_T0069254-748-MGP_AKRJ_P006925484 (aa)--
MGP_AKRJ_T0069259-1411-MGP_AKRJ_P006925984 (aa)--
MGP_AKRJ_T0069258-709-MGP_AKRJ_P0069258199 (aa)--
Gene Model
Click here to download MGP_AKRJ_G0029042's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0029042's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AKRJ_G0029042Tardbp7934.021MGP_AKRJ_G0029872Msi16234.021
MGP_AKRJ_G0029042Tardbp7238.806MGP_AKRJ_G0033245Elavl15931.481
MGP_AKRJ_G0029042Tardbp9430.282MGP_AKRJ_G0030630Hnrnpa2b16630.348
MGP_AKRJ_G0029042Tardbp8831.818MGP_AKRJ_G0017431Dazap18935.065
MGP_AKRJ_G0029042Tardbp7738.194MGP_AKRJ_G0029692Hnrnpd10064.000
MGP_AKRJ_G0029042Tardbp9235.000MGP_AKRJ_G0035651Rbmx7835.000
MGP_AKRJ_G0029042Tardbp8633.146MGP_AKRJ_G0018208Hnrnpab8232.099
MGP_AKRJ_G0029042Tardbp7931.818MGP_AKRJ_G0018862Msi210035.398
MGP_AKRJ_G0029042Tardbp7731.447MGP_AKRJ_G0029694Hnrnpdl6430.000
MGP_AKRJ_G0029042Tardbp8036.508MGP_AKRJ_G0025802Hnrnpa35531.132

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