EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0029623 (Gene tree)
Gene ID: -
Gene Symbol: Grsf1
Alias: BB232551|C80280|D5Wsu31e
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 18875 bases
Position: chr5:88959267-88978141
Accession: 106479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0072490	RRM_1	PF00076.22	2.4e-23	1	1
MGP_AKRJ_P0072491	RRM_1	PF00076.22	8.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0072491	-	2538	-	MGP_AKRJ_P0072491	479 (aa)	-	-
MGP_AKRJ_T0072490	-	3386	-	MGP_AKRJ_P0072490	362 (aa)	-	Q8C5Q4
MGP_AKRJ_T0072493	-	321	-	-	- (aa)	-	-
MGP_AKRJ_T0072492	-	899	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0029623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0029623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0029623	Grsf1	92	65.333	MGP_AKRJ_G0018187	Hnrnph1	60	64.474
MGP_AKRJ_G0029623	Grsf1	70	67.532	MGP_AKRJ_G0017248	Hnrnph3	58	67.089
MGP_AKRJ_G0029623	Grsf1	70	61.842	MGP_AKRJ_G0035975	Hnrnph2	62	61.842
MGP_AKRJ_G0029623	Grsf1	91	46.067	MGP_AKRJ_G0031080	-	99	45.570