EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0029692 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpd
Alias: Auf1|Hnrpd
Full Name: heterogeneous nuclear ribonucleoprotein D
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 22890 bases
Position: chr5:100871949-100894838
Accession: 101947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0072779	RRM_1	PF00076.22	6.4e-36	1	2
MGP_AKRJ_P0072779	RRM_1	PF00076.22	6.4e-36	2	2
MGP_AKRJ_P0072777	RRM_1	PF00076.22	7.9e-36	1	2
MGP_AKRJ_P0072777	RRM_1	PF00076.22	7.9e-36	2	2
MGP_AKRJ_P0072778	RRM_1	PF00076.22	1.1e-35	1	2
MGP_AKRJ_P0072778	RRM_1	PF00076.22	1.1e-35	2	2
MGP_AKRJ_P0072776	RRM_1	PF00076.22	1.3e-35	1	2
MGP_AKRJ_P0072776	RRM_1	PF00076.22	1.3e-35	2	2
MGP_AKRJ_P0072785	RRM_1	PF00076.22	2.3e-23	1	1
MGP_AKRJ_P0072786	RRM_1	PF00076.22	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0072785	-	457	-	MGP_AKRJ_P0072785	107 (aa)	-	-
MGP_AKRJ_T0072784	-	425	-	-	- (aa)	-	-
MGP_AKRJ_T0072778	-	1634	-	MGP_AKRJ_P0072778	324 (aa)	-	-
MGP_AKRJ_T0072779	-	1501	-	MGP_AKRJ_P0072779	275 (aa)	-	-
MGP_AKRJ_T0072786	-	442	-	MGP_AKRJ_P0072786	25 (aa)	-	-
MGP_AKRJ_T0072781	-	737	-	MGP_AKRJ_P0072781	150 (aa)	-	-
MGP_AKRJ_T0072780	-	1117	-	MGP_AKRJ_P0072780	215 (aa)	-	-
MGP_AKRJ_T0072783	-	1068	-	MGP_AKRJ_P0072783	74 (aa)	-	-
MGP_AKRJ_T0072782	-	699	-	MGP_AKRJ_P0072782	131 (aa)	-	-
MGP_AKRJ_T0072776	-	6762	XM_006534735	MGP_AKRJ_P0072776	343 (aa)	XP_006534798	Q60668
MGP_AKRJ_T0072777	-	1964	-	MGP_AKRJ_P0072777	294 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0029692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0029692's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0029692	Hnrnpd	100	56.000	MGP_AKRJ_G0017431	Dazap1	98	41.935
MGP_AKRJ_G0029692	Hnrnpd	97	44.545	MGP_AKRJ_G0030630	Hnrnpa2b1	72	41.148
MGP_AKRJ_G0029692	Hnrnpd	100	37.838	MGP_AKRJ_G0020559	Hnrnpa0	73	38.272
MGP_AKRJ_G0029692	Hnrnpd	100	80.000	MGP_AKRJ_G0029694	Hnrnpdl	87	64.835
MGP_AKRJ_G0029692	Hnrnpd	51	36.364	MGP_AKRJ_G0026890	Rbm38	51	36.364
MGP_AKRJ_G0029692	Hnrnpd	69	35.294	MGP_AKRJ_G0015974	Boll	50	35.294
MGP_AKRJ_G0029692	Hnrnpd	71	33.333	MGP_AKRJ_G0019921	Slirp	70	33.333
MGP_AKRJ_G0029692	Hnrnpd	69	38.667	MGP_AKRJ_G0033715	-	62	45.833
MGP_AKRJ_G0029692	Hnrnpd	55	35.593	MGP_AKRJ_G0030872	Tia1	69	38.462
MGP_AKRJ_G0029692	Hnrnpd	70	32.000	MGP_AKRJ_G0028355	Elavl2	58	31.169
MGP_AKRJ_G0029692	Hnrnpd	100	88.000	MGP_AKRJ_G0018208	Hnrnpab	77	70.183
MGP_AKRJ_G0029692	Hnrnpd	70	34.667	MGP_AKRJ_G0035451	Rbm3	79	37.931
MGP_AKRJ_G0029692	Hnrnpd	57	31.884	MGP_AKRJ_G0029998	Snrnp35	51	35.484
MGP_AKRJ_G0029692	Hnrnpd	100	64.000	MGP_AKRJ_G0029042	Tardbp	77	38.194
MGP_AKRJ_G0029692	Hnrnpd	84	36.559	MGP_AKRJ_G0017425	Cirbp	83	37.113
MGP_AKRJ_G0029692	Hnrnpd	100	68.000	MGP_AKRJ_G0029872	Msi1	59	49.485
MGP_AKRJ_G0029692	Hnrnpd	97	46.364	MGP_AKRJ_G0025802	Hnrnpa3	60	43.689
MGP_AKRJ_G0029692	Hnrnpd	100	72.000	MGP_AKRJ_G0018862	Msi2	100	53.982
MGP_AKRJ_G0029692	Hnrnpd	84	37.363	MGP_AKRJ_G0035651	Rbmx	82	43.750