EuRBPDB

Description

Ensembl ID: MGP_AKRJ_G0029694 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 6111 bases
Position: chr5:100947816-100953926
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0072790	RRM_1	PF00076.22	2.3e-33	1	2
MGP_AKRJ_P0072790	RRM_1	PF00076.22	2.3e-33	2	2
MGP_AKRJ_P0072789	RRM_1	PF00076.22	5.3e-33	1	2
MGP_AKRJ_P0072789	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0072794	-	846	-	-	- (aa)	-	-
MGP_AKRJ_T0072792	-	884	-	-	- (aa)	-	-
MGP_AKRJ_T0072793	-	1506	-	MGP_AKRJ_P0072793	110 (aa)	-	-
MGP_AKRJ_T0072790	-	2374	-	MGP_AKRJ_P0072790	322 (aa)	-	-
MGP_AKRJ_T0072791	-	2149	-	MGP_AKRJ_P0072791	420 (aa)	-	-
MGP_AKRJ_T0072789	-	2752	-	MGP_AKRJ_P0072789	420 (aa)	-	-
MGP_AKRJ_T0072788	-	1842	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0029694	Hnrnpdl	87	64.835	MGP_AKRJ_G0029692	Hnrnpd	100	80.000
MGP_AKRJ_G0029694	Hnrnpdl	54	36.709	MGP_AKRJ_G0017425	Cirbp	73	36.709
MGP_AKRJ_G0029694	Hnrnpdl	64	30.000	MGP_AKRJ_G0029042	Tardbp	77	31.447
MGP_AKRJ_G0029694	Hnrnpdl	69	36.036	MGP_AKRJ_G0017431	Dazap1	99	39.881
MGP_AKRJ_G0029694	Hnrnpdl	89	57.292	MGP_AKRJ_G0018208	Hnrnpab	82	58.419
MGP_AKRJ_G0029694	Hnrnpdl	78	41.634	MGP_AKRJ_G0018862	Msi2	100	54.867
MGP_AKRJ_G0029694	Hnrnpdl	55	40.000	MGP_AKRJ_G0025802	Hnrnpa3	79	33.882
MGP_AKRJ_G0029694	Hnrnpdl	51	34.706	MGP_AKRJ_G0020559	Hnrnpa0	56	34.706
MGP_AKRJ_G0029694	Hnrnpdl	75	39.676	MGP_AKRJ_G0029872	Msi1	58	48.052
MGP_AKRJ_G0029694	Hnrnpdl	58	38.542	MGP_AKRJ_G0030630	Hnrnpa2b1	58	38.824