EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0029753 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: AW495828|Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 9369 bases
Position: chr5:108961818-108971186
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0073073	zf-C2H2	PF00096.26	5e-28	1	6
MGP_AKRJ_P0073073	zf-C2H2	PF00096.26	5e-28	2	6
MGP_AKRJ_P0073073	zf-C2H2	PF00096.26	5e-28	3	6
MGP_AKRJ_P0073073	zf-C2H2	PF00096.26	5e-28	4	6
MGP_AKRJ_P0073073	zf-C2H2	PF00096.26	5e-28	5	6
MGP_AKRJ_P0073073	zf-C2H2	PF00096.26	5e-28	6	6
MGP_AKRJ_P0073074	zf-C2H2	PF00096.26	5e-28	1	6
MGP_AKRJ_P0073074	zf-C2H2	PF00096.26	5e-28	2	6
MGP_AKRJ_P0073074	zf-C2H2	PF00096.26	5e-28	3	6
MGP_AKRJ_P0073074	zf-C2H2	PF00096.26	5e-28	4	6
MGP_AKRJ_P0073074	zf-C2H2	PF00096.26	5e-28	5	6
MGP_AKRJ_P0073074	zf-C2H2	PF00096.26	5e-28	6	6
MGP_AKRJ_P0073075	zf-C2H2	PF00096.26	1.5e-27	1	6
MGP_AKRJ_P0073075	zf-C2H2	PF00096.26	1.5e-27	2	6
MGP_AKRJ_P0073075	zf-C2H2	PF00096.26	1.5e-27	3	6
MGP_AKRJ_P0073075	zf-C2H2	PF00096.26	1.5e-27	4	6
MGP_AKRJ_P0073075	zf-C2H2	PF00096.26	1.5e-27	5	6
MGP_AKRJ_P0073075	zf-C2H2	PF00096.26	1.5e-27	6	6
MGP_AKRJ_P0073076	zf-C2H2	PF00096.26	9.4e-25	1	4
MGP_AKRJ_P0073076	zf-C2H2	PF00096.26	9.4e-25	2	4
MGP_AKRJ_P0073076	zf-C2H2	PF00096.26	9.4e-25	3	4
MGP_AKRJ_P0073076	zf-C2H2	PF00096.26	9.4e-25	4	4
MGP_AKRJ_P0073076	zf-met	PF12874.7	2.2e-08	1	1
MGP_AKRJ_P0073073	zf-met	PF12874.7	2.5e-07	1	1
MGP_AKRJ_P0073074	zf-met	PF12874.7	2.5e-07	1	1
MGP_AKRJ_P0073075	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0073074	-	2860	-	MGP_AKRJ_P0073074	423 (aa)	-	-
MGP_AKRJ_T0073075	-	2639	-	MGP_AKRJ_P0073075	489 (aa)	-	-
MGP_AKRJ_T0073076	-	1482	-	MGP_AKRJ_P0073076	135 (aa)	-	-
MGP_AKRJ_T0073077	-	689	-	MGP_AKRJ_P0073077	186 (aa)	-	-
MGP_AKRJ_T0073073	-	2648	XM_006534791	MGP_AKRJ_P0073073	423 (aa)	XP_006534854	A0A0R4J292

Gene Model

Click here to download MGP_AKRJ_G0029753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0029753's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0029753	Gfi1	100	50.000	MGP_AKRJ_G0031726	Zfp111	74	50.000
MGP_AKRJ_G0029753	Gfi1	100	49.606	MGP_AKRJ_G0031725	Zfp114	63	47.771
MGP_AKRJ_G0029753	Gfi1	100	44.882	MGP_AKRJ_G0032032	Zfp715	63	43.210
MGP_AKRJ_G0029753	Gfi1	100	48.276	MGP_AKRJ_G0018288	Zfp672	90	48.276
MGP_AKRJ_G0029753	Gfi1	100	39.535	MGP_AKRJ_G0033892	Zfp319	93	40.116
MGP_AKRJ_G0029753	Gfi1	100	45.238	MGP_AKRJ_G0018338	Zfp867	79	43.023
MGP_AKRJ_G0029753	Gfi1	99	44.444	MGP_AKRJ_G0031482	Zfp784	71	44.444
MGP_AKRJ_G0029753	Gfi1	100	48.031	MGP_AKRJ_G0031729	Zfp93	90	45.517
MGP_AKRJ_G0029753	Gfi1	100	57.895	MGP_AKRJ_G0031728	Zfp108	64	45.000
MGP_AKRJ_G0029753	Gfi1	100	48.031	MGP_AKRJ_G0031724	Zfp235	61	46.377
MGP_AKRJ_G0029753	Gfi1	100	46.269	MGP_AKRJ_G0023165	Zfp51	75	44.828
MGP_AKRJ_G0029753	Gfi1	100	45.312	MGP_AKRJ_G0023163	Zfp677	79	43.452
MGP_AKRJ_G0029753	Gfi1	100	50.746	MGP_AKRJ_G0034323	Zfp26	77	47.159
MGP_AKRJ_G0029753	Gfi1	100	49.254	MGP_AKRJ_G0021954	Zfp251	74	47.024
MGP_AKRJ_G0029753	Gfi1	100	54.321	MGP_AKRJ_G0032947	Zfp768	51	45.833
MGP_AKRJ_G0029753	Gfi1	100	50.000	MGP_AKRJ_G0032029	Zfp141	65	50.000
MGP_AKRJ_G0029753	Gfi1	99	47.287	MGP_AKRJ_G0030596	Repin1	90	47.287
MGP_AKRJ_G0029753	Gfi1	100	47.863	MGP_AKRJ_G0026830	Zfp334	65	47.651
MGP_AKRJ_G0029753	Gfi1	100	44.444	MGP_AKRJ_G0020630	Zfp759	89	44.444
MGP_AKRJ_G0029753	Gfi1	100	44.030	MGP_AKRJ_G0034385	Zfp872	78	44.030
MGP_AKRJ_G0029753	Gfi1	99	45.714	MGP_AKRJ_G0031761	Zfp574	62	43.925
MGP_AKRJ_G0029753	Gfi1	99	45.038	MGP_AKRJ_G0032951	E430018J23Rik	60	42.197
MGP_AKRJ_G0029753	Gfi1	100	45.794	MGP_AKRJ_G0018193	Zfp454	68	42.262
MGP_AKRJ_G0029753	Gfi1	100	47.788	MGP_AKRJ_G0020629	Rslcan18	71	47.788
MGP_AKRJ_G0029753	Gfi1	100	45.522	MGP_AKRJ_G0033673	Zfp709	80	43.976
MGP_AKRJ_G0029753	Gfi1	100	46.094	MGP_AKRJ_G0033674	Zfp882	85	46.094
MGP_AKRJ_G0029753	Gfi1	99	48.507	MGP_AKRJ_G0026402	Zfp661	62	48.507
MGP_AKRJ_G0029753	Gfi1	100	46.739	MGP_AKRJ_G0024540	Zfp236	54	46.739
MGP_AKRJ_G0029753	Gfi1	100	42.857	MGP_AKRJ_G0023188	Zscan10	77	42.771
MGP_AKRJ_G0029753	Gfi1	99	47.368	MGP_AKRJ_G0031479	Zfp865	66	46.753
MGP_AKRJ_G0029753	Gfi1	100	48.507	MGP_AKRJ_G0031900	Zfp420	98	48.507
MGP_AKRJ_G0029753	Gfi1	100	46.457	MGP_AKRJ_G0034050	Zfp1	60	43.478
MGP_AKRJ_G0029753	Gfi1	100	48.062	MGP_AKRJ_G0031471	Zfp628	54	48.062
MGP_AKRJ_G0029753	Gfi1	100	47.368	MGP_AKRJ_G0026868	Zfp64	70	38.298
MGP_AKRJ_G0029753	Gfi1	100	46.296	MGP_AKRJ_G0031730	Zfp61	57	46.296
MGP_AKRJ_G0029753	Gfi1	100	46.457	MGP_AKRJ_G0031731	Zfp94	65	44.970
MGP_AKRJ_G0029753	Gfi1	100	43.590	MGP_AKRJ_G0031078	Zfp637	71	43.590
MGP_AKRJ_G0029753	Gfi1	99	45.133	MGP_AKRJ_G0030729	Prdm5	74	43.846
MGP_AKRJ_G0029753	Gfi1	100	48.031	MGP_AKRJ_G0020646	Zfp748	92	48.447