EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0030001 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 16316 bases
Position: chr5:126998390-127014705
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0074444	ResIII	PF04851.15	5.6e-07	1	1
MGP_AKRJ_P0074444	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0074448	-	1430	-	-	- (aa)	-	-
MGP_AKRJ_T0074449	-	824	-	-	- (aa)	-	-
MGP_AKRJ_T0074444	-	1884	-	MGP_AKRJ_P0074444	618 (aa)	-	Q6ZPL9
MGP_AKRJ_T0074445	-	3516	-	MGP_AKRJ_P0074445	135 (aa)	-	-
MGP_AKRJ_T0074446	-	445	-	-	- (aa)	-	-
MGP_AKRJ_T0074447	-	477	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0030001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0030001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0030001	Ddx55	61	30.750	MGP_AKRJ_G0018800	Ddx52	62	30.750
MGP_AKRJ_G0030001	Ddx55	58	32.044	MGP_AKRJ_G0034977	Ddx43	53	32.044
MGP_AKRJ_G0030001	Ddx55	57	35.977	MGP_AKRJ_G0031315	Ddx47	81	35.977
MGP_AKRJ_G0030001	Ddx55	57	35.635	MGP_AKRJ_G0020534	Ddx41	55	35.440
MGP_AKRJ_G0030001	Ddx55	57	30.362	MGP_AKRJ_G0022614	Eif4a2	93	30.362
MGP_AKRJ_G0030001	Ddx55	73	38.631	MGP_AKRJ_G0034716	Ddx10	50	38.631
MGP_AKRJ_G0030001	Ddx55	57	35.733	MGP_AKRJ_G0016865	D1Pas1	54	35.733
MGP_AKRJ_G0030001	Ddx55	56	33.056	MGP_AKRJ_G0033607	Ddx49	92	32.493
MGP_AKRJ_G0030001	Ddx55	57	32.687	MGP_AKRJ_G0022013	Ddx17	53	32.687
MGP_AKRJ_G0030001	Ddx55	57	30.137	MGP_AKRJ_G0019250	Ddx5	60	30.137
MGP_AKRJ_G0030001	Ddx55	56	31.429	MGP_AKRJ_G0016489	Ddx59	54	31.429
MGP_AKRJ_G0030001	Ddx55	77	36.042	MGP_AKRJ_G0016360	Ddx18	68	36.192
MGP_AKRJ_G0030001	Ddx55	58	30.886	MGP_AKRJ_G0033981	Ddx28	69	30.886
MGP_AKRJ_G0030001	Ddx55	58	30.769	MGP_AKRJ_G0018483	Eif4a1	96	30.193
MGP_AKRJ_G0030001	Ddx55	72	31.528	MGP_AKRJ_G0025480	Ddx31	74	31.528