EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0030377 (Gene tree)
Gene ID: -
Gene Symbol: Lsm8
Alias: 2010003I05Rik|AW214405|Lsm8|Naa38
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 7173 bases
Position: chr6:16027583-16034755
Accession: 1923772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0076420	LSM	PF01423.22	4.4e-19	1	1
MGP_AKRJ_P0076423	LSM	PF01423.22	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0076420	-	807	-	MGP_AKRJ_P0076420	96 (aa)	-	Q6ZWM4
MGP_AKRJ_T0076421	-	3305	-	-	- (aa)	-	-
MGP_AKRJ_T0076422	-	890	-	-	- (aa)	-	-
MGP_AKRJ_T0076423	-	503	-	MGP_AKRJ_P0076423	100 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0030377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0030377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0030377	Lsm8	73	35.526	MGP_AKRJ_G0017463	-	72	35.526
MGP_AKRJ_G0030377	Lsm8	92	34.091	MGP_AKRJ_G0033393	Lsm1	65	34.091