EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0030408 (Gene tree)
Gene ID: -
Gene Symbol: Arf5
Alias: -
Full Name: ADP-ribosylation factor 5
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 3042 bases
Position: chr6:25873503-25876544
Accession: 99434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0076540	MMR_HSR1	PF01926.23	6.2e-05	1	1
MGP_AKRJ_P0076541	MMR_HSR1	PF01926.23	6.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0076542	-	918	-	-	- (aa)	-	-
MGP_AKRJ_T0076541	-	830	-	MGP_AKRJ_P0076541	180 (aa)	-	-
MGP_AKRJ_T0076540	-	1116	-	MGP_AKRJ_P0076540	180 (aa)	-	P84084

Gene Model

Click here to download MGP_AKRJ_G0030408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0030408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0030408	Arf5	92	44.242	MGP_AKRJ_G0025156	Arl3	91	44.242
MGP_AKRJ_G0030408	Arf5	96	42.197	MGP_AKRJ_G0018984	Arl5c	96	42.197
MGP_AKRJ_G0030408	Arf5	97	42.541	MGP_AKRJ_G0019636	Arl4a	91	42.541
MGP_AKRJ_G0030408	Arf5	94	34.225	MGP_AKRJ_G0026957	Arfrp1	90	38.393
MGP_AKRJ_G0030408	Arf5	90	45.455	MGP_AKRJ_G0027224	Arl14	86	45.455
MGP_AKRJ_G0030408	Arf5	92	41.317	MGP_AKRJ_G0021373	Arl11	95	41.317
MGP_AKRJ_G0030408	Arf5	98	78.531	MGP_AKRJ_G0018332	Arf1	81	78.531
MGP_AKRJ_G0030408	Arf5	100	80.000	MGP_AKRJ_G0019208	Arf2	99	80.000
MGP_AKRJ_G0030408	Arf5	100	45.556	MGP_AKRJ_G0025680	Arl5a	100	45.556
MGP_AKRJ_G0030408	Arf5	87	60.510	MGP_AKRJ_G0017568	Arl1	95	59.302
MGP_AKRJ_G0030408	Arf5	100	40.323	MGP_AKRJ_G0019147	Arl4d	91	40.323
MGP_AKRJ_G0030408	Arf5	96	31.609	MGP_AKRJ_G0031002	Arl8b	94	31.609
MGP_AKRJ_G0030408	Arf5	95	46.328	MGP_AKRJ_G0016230	Arl4c	92	46.328
MGP_AKRJ_G0030408	Arf5	96	30.460	MGP_AKRJ_G0016465	Arl8a	94	30.460
MGP_AKRJ_G0030408	Arf5	100	78.889	MGP_AKRJ_G0022242	Arf3	99	78.889
MGP_AKRJ_G0030408	Arf5	92	46.386	MGP_AKRJ_G0024690	Arl2	90	46.386
MGP_AKRJ_G0030408	Arf5	91	36.527	MGP_AKRJ_G0022870	Arl6	90	36.527
MGP_AKRJ_G0030408	Arf5	100	44.444	MGP_AKRJ_G0025312	Arl5b	99	44.444
MGP_AKRJ_G0030408	Arf5	70	35.938	MGP_AKRJ_G0020503	Arl10	62	35.938