EuRBPDB

Description

Ensembl ID: MGP_AKRJ_G0030724 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 67935 bases
Position: chr6:64109215-64177149
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0077842	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0077841	-	602	XM_006505509	MGP_AKRJ_P0077841	134 (aa)	XP_006505572	Q04692
MGP_AKRJ_T0077852	-	726	-	MGP_AKRJ_P0077852	45 (aa)	-	-
MGP_AKRJ_T0077843	-	466	-	-	- (aa)	-	-
MGP_AKRJ_T0077842	-	5168	-	MGP_AKRJ_P0077842	1021 (aa)	-	-
MGP_AKRJ_T0077845	-	734	-	MGP_AKRJ_P0077845	73 (aa)	-	-
MGP_AKRJ_T0077844	-	600	-	MGP_AKRJ_P0077844	73 (aa)	-	-
MGP_AKRJ_T0077847	-	739	-	MGP_AKRJ_P0077847	73 (aa)	-	-
MGP_AKRJ_T0077846	-	472	-	MGP_AKRJ_P0077846	68 (aa)	-	-
MGP_AKRJ_T0077849	-	4179	-	MGP_AKRJ_P0077849	123 (aa)	-	-
MGP_AKRJ_T0077848	-	2821	-	-	- (aa)	-	-
MGP_AKRJ_T0077855	-	2526	-	-	- (aa)	-	-
MGP_AKRJ_T0077850	-	643	-	-	- (aa)	-	-
MGP_AKRJ_T0077853	-	3062	-	-	- (aa)	-	-
MGP_AKRJ_T0077851	-	635	-	-	- (aa)	-	-
MGP_AKRJ_T0077854	-	643	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0030724	Smarcad1	50	30.112	MGP_AKRJ_G0028529	Rad54l	66	30.112
MGP_AKRJ_G0030724	Smarcad1	51	37.705	MGP_AKRJ_G0025040	Hells	66	37.887
MGP_AKRJ_G0030724	Smarcad1	50	35.135	MGP_AKRJ_G0027570	Chd1l	51	35.135