EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0030875 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp1
Alias: WBP17|[a]CP-1|alphaCP-1|hnRNP E1
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 1828 bases
Position: chr6:86874688-86876515
Accession: 1345635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0078585	KH_1	PF00013.29	2.7e-51	1	3
MGP_AKRJ_P0078585	KH_1	PF00013.29	2.7e-51	2	3
MGP_AKRJ_P0078585	KH_1	PF00013.29	2.7e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0078585	-	1828	-	MGP_AKRJ_P0078585	356 (aa)	-	P60335

Gene Model

Click here to download MGP_AKRJ_G0030875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0030875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0030875	Pcbp1	60	31.169	MGP_AKRJ_G0025533	Fubp3	88	32.370
MGP_AKRJ_G0030875	Pcbp1	85	42.857	MGP_AKRJ_G0020565	Hnrnpk	78	31.724
MGP_AKRJ_G0030875	Pcbp1	99	66.484	MGP_AKRJ_G0017328	Pcbp3	99	65.873
MGP_AKRJ_G0030875	Pcbp1	98	53.541	MGP_AKRJ_G0035143	-	97	67.826
MGP_AKRJ_G0030875	Pcbp1	69	34.667	MGP_AKRJ_G0023876	Khsrp	54	34.667
MGP_AKRJ_G0030875	Pcbp1	66	41.558	MGP_AKRJ_G0031651	Nova2	51	41.558
MGP_AKRJ_G0030875	Pcbp1	70	40.541	MGP_AKRJ_G0019649	Nova1	57	40.541
MGP_AKRJ_G0030875	Pcbp1	100	81.744	MGP_AKRJ_G0022352	Pcbp2	100	81.744
MGP_AKRJ_G0030875	Pcbp1	70	43.243	MGP_AKRJ_G0022603	Igf2bp2	69	33.696