EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0030902 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 48309 bases
Position: chr6:88410568-88458876
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0078709	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_AKRJ_P0078710	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_AKRJ_P0078711	MMR_HSR1	PF01926.23	7.4e-07	1	1
MGP_AKRJ_P0078712	MMR_HSR1	PF01926.23	7.4e-07	1	1
MGP_AKRJ_P0078713	MMR_HSR1	PF01926.23	7.4e-07	1	1
MGP_AKRJ_P0078715	MMR_HSR1	PF01926.23	7.7e-07	1	1
MGP_AKRJ_P0078714	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0078710	-	2237	-	MGP_AKRJ_P0078710	207 (aa)	-	-
MGP_AKRJ_T0078711	-	1866	-	MGP_AKRJ_P0078711	210 (aa)	-	-
MGP_AKRJ_T0078712	-	1664	-	MGP_AKRJ_P0078712	210 (aa)	-	-
MGP_AKRJ_T0078713	-	1282	-	MGP_AKRJ_P0078713	210 (aa)	-	-
MGP_AKRJ_T0078714	-	424	-	MGP_AKRJ_P0078714	88 (aa)	-	-
MGP_AKRJ_T0078715	-	550	-	MGP_AKRJ_P0078715	98 (aa)	-	-
MGP_AKRJ_T0078709	-	2366	-	MGP_AKRJ_P0078709	207 (aa)	-	P51150

Gene Model

Click here to download MGP_AKRJ_G0030902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0030902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0030902	Rab7	91	46.067	MGP_AKRJ_G0021227	Rab2b	91	36.634
MGP_AKRJ_G0030902	Rab7	90	48.864	MGP_AKRJ_G0024062	Rab18	95	35.821
MGP_AKRJ_G0030902	Rab7	91	40.449	MGP_AKRJ_G0022175	Rabl2	71	33.735
MGP_AKRJ_G0030902	Rab7	100	37.374	MGP_AKRJ_G0027127	Rab33b	79	36.559
MGP_AKRJ_G0030902	Rab7	97	45.263	MGP_AKRJ_G0023815	Rab5a	81	40.782
MGP_AKRJ_G0030902	Rab7	73	33.113	MGP_AKRJ_G0027614	Nras	95	33.108
MGP_AKRJ_G0030902	Rab7	76	33.121	MGP_AKRJ_G0031382	Kras	87	33.929
MGP_AKRJ_G0030902	Rab7	94	35.870	MGP_AKRJ_G0019500	Dnajc27	60	36.145
MGP_AKRJ_G0030902	Rab7	91	46.067	MGP_AKRJ_G0029878	Rab35	95	34.872
MGP_AKRJ_G0030902	Rab7	92	42.222	MGP_AKRJ_G0032424	Rab30	88	38.043
MGP_AKRJ_G0030902	Rab7	79	31.169	MGP_AKRJ_G0035082	Mras	80	33.333
MGP_AKRJ_G0030902	Rab7	91	47.191	MGP_AKRJ_G0032484	Rab6a	94	36.000
MGP_AKRJ_G0030902	Rab7	91	42.222	MGP_AKRJ_G0035597	Rab33a	85	36.111
MGP_AKRJ_G0030902	Rab7	98	38.542	MGP_AKRJ_G0024632	Rab1b	97	34.848
MGP_AKRJ_G0030902	Rab7	98	39.583	MGP_AKRJ_G0018001	Rab1a	78	39.264
MGP_AKRJ_G0030902	Rab7	91	44.944	MGP_AKRJ_G0027963	Rab2a	84	36.269
MGP_AKRJ_G0030902	Rab7	92	47.778	MGP_AKRJ_G0023906	Rab31	82	44.512
MGP_AKRJ_G0030902	Rab7	91	37.778	MGP_AKRJ_G0035770	Rab39b	76	34.545
MGP_AKRJ_G0030902	Rab7	92	46.667	MGP_AKRJ_G0026897	Rab22a	82	40.854
MGP_AKRJ_G0030902	Rab7	91	43.820	MGP_AKRJ_G0025597	Rab14	83	40.310
MGP_AKRJ_G0030902	Rab7	90	47.727	MGP_AKRJ_G0019104	Rab5c	77	42.442
MGP_AKRJ_G0030902	Rab7	90	30.526	MGP_AKRJ_G0033128	Hras	96	31.841
MGP_AKRJ_G0030902	Rab7	94	43.478	MGP_AKRJ_G0015842	Rab23	70	33.918
MGP_AKRJ_G0030902	Rab7	93	42.857	MGP_AKRJ_G0034853	Rab11a	87	38.686
MGP_AKRJ_G0030902	Rab7	99	40.206	MGP_AKRJ_G0019799	Rab15	100	30.455
MGP_AKRJ_G0030902	Rab7	91	47.191	MGP_AKRJ_G0035105	Rab6b	94	36.683
MGP_AKRJ_G0030902	Rab7	92	43.333	MGP_AKRJ_G0017288	Rab36	63	36.571
MGP_AKRJ_G0030902	Rab7	90	48.864	MGP_AKRJ_G0023915	Rab12	64	36.316
MGP_AKRJ_G0030902	Rab7	91	44.944	MGP_AKRJ_G0027328	Rab25	75	39.157
MGP_AKRJ_G0030902	Rab7	94	49.462	MGP_AKRJ_G0019310	Rab37	76	41.071
MGP_AKRJ_G0030902	Rab7	97	35.789	MGP_AKRJ_G0031489	Rasl2-9	75	33.728
MGP_AKRJ_G0030902	Rab7	93	42.857	MGP_AKRJ_G0023460	Rab11b	72	40.491
MGP_AKRJ_G0030902	Rab7	83	35.714	MGP_AKRJ_G0019147	Arl4d	58	32.520
MGP_AKRJ_G0030902	Rab7	98	60.417	MGP_AKRJ_G0036011	Rab9b	99	53.202