EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AKRJ_G0031127 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_akrj
Status
putative
Strand
Minus strand
Length
27573 bases
Position
chr6:124260779-124288351
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AKRJ_P0079900APOBEC_NPF08210.118.3e-3011
MGP_AKRJ_P0079901APOBEC_NPF08210.118.3e-3011
MGP_AKRJ_P0079902APOBEC_NPF08210.118.3e-3011
MGP_AKRJ_P0079903APOBEC_NPF08210.114.2e-1711
MGP_AKRJ_P0079904APOBEC_NPF08210.113.1e-1311
MGP_AKRJ_P0079900APOBEC_CPF05240.141.8e-2211
MGP_AKRJ_P0079901APOBEC_CPF05240.141.8e-2211
MGP_AKRJ_P0079902APOBEC_CPF05240.141.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AKRJ_T0079906-360-MGP_AKRJ_P007990625 (aa)--
MGP_AKRJ_T0079907-560--- (aa)--
MGP_AKRJ_T0079904-775-MGP_AKRJ_P0079904113 (aa)--
MGP_AKRJ_T0079905-372-MGP_AKRJ_P007990543 (aa)--
MGP_AKRJ_T0079902-2111-MGP_AKRJ_P0079902229 (aa)--
MGP_AKRJ_T0079903-666-MGP_AKRJ_P0079903121 (aa)--
MGP_AKRJ_T0079900-2249XM_006505401MGP_AKRJ_P0079900229 (aa)XP_006505464P51908
MGP_AKRJ_T0079901-2056-MGP_AKRJ_P0079901229 (aa)--
MGP_AKRJ_T0079908-520--- (aa)--
Gene Model
Click here to download MGP_AKRJ_G0031127's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0031127's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AKRJ_G0031127Apobec17434.737MGP_AKRJ_G0022025Apobec38438.028
MGP_AKRJ_G0031127Apobec15639.706MGP_AKRJ_G0031126Aicda5341.509

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