EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0031736 (Gene tree)
Gene ID: -
Gene Symbol: Irgc1
Alias: F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc|LOC210145|LOC381989
Full Name: immunity-related GTPase family%2C cinema 1
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 20280 bases
Position: chr7:22734293-22754572
Accession: 2685948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0082175	MMR_HSR1	PF01926.23	6.4e-06	1	1
MGP_AKRJ_P0082176	MMR_HSR1	PF01926.23	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0082175	-	1835	XM_006539708	MGP_AKRJ_P0082175	463 (aa)	XP_006539771	A0A0U1RQ16
MGP_AKRJ_T0082177	-	383	-	MGP_AKRJ_P0082177	82 (aa)	-	-
MGP_AKRJ_T0082176	-	1737	-	MGP_AKRJ_P0082176	463 (aa)	-	-
MGP_AKRJ_T0082179	-	342	-	-	- (aa)	-	-
MGP_AKRJ_T0082178	-	661	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0031736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0031736's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0031736	Irgc1	62	32.872	MGP_AKRJ_G0018285	Irgm2	69	32.872
MGP_AKRJ_G0031736	Irgc1	65	34.106	MGP_AKRJ_G0018284	Igtp	68	34.106
MGP_AKRJ_G0031736	Irgc1	71	30.183	MGP_AKRJ_G0018144	Irgm1	76	35.169
MGP_AKRJ_G0031736	Irgc1	82	34.987	MGP_AKRJ_G0018145	-	89	34.987
MGP_AKRJ_G0031736	Irgc1	83	34.456	MGP_AKRJ_G0018146	-	83	34.456
MGP_AKRJ_G0031736	Irgc1	68	42.038	MGP_AKRJ_G0018153	Ifi47	75	42.038
MGP_AKRJ_G0031736	Irgc1	82	34.987	MGP_AKRJ_G0018152	-	89	34.987
MGP_AKRJ_G0031736	Irgc1	82	34.211	MGP_AKRJ_G0024396	F830016B08Rik	88	34.211
MGP_AKRJ_G0031736	Irgc1	82	33.158	MGP_AKRJ_G0024397	Iigp1	90	33.158
MGP_AKRJ_G0031736	Irgc1	68	36.909	MGP_AKRJ_G0024394	Gm4951	77	36.909
MGP_AKRJ_G0031736	Irgc1	84	35.550	MGP_AKRJ_G0024395	Gm4841	91	35.806