EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0031872 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 13755 bases
Position: chr7:27651000-27664754
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0082681	RRM_5	PF13893.6	2.4e-60	1	2
MGP_AKRJ_P0082681	RRM_5	PF13893.6	2.4e-60	2	2
MGP_AKRJ_P0082685	RRM_5	PF13893.6	2.4e-60	1	2
MGP_AKRJ_P0082685	RRM_5	PF13893.6	2.4e-60	2	2
MGP_AKRJ_P0082686	RRM_5	PF13893.6	2.9e-60	1	2
MGP_AKRJ_P0082686	RRM_5	PF13893.6	2.9e-60	2	2
MGP_AKRJ_P0082683	RRM_5	PF13893.6	1.9e-59	1	2
MGP_AKRJ_P0082683	RRM_5	PF13893.6	1.9e-59	2	2
MGP_AKRJ_P0082681	RRM_1	PF00076.22	3.3e-22	1	2
MGP_AKRJ_P0082681	RRM_1	PF00076.22	3.3e-22	2	2
MGP_AKRJ_P0082685	RRM_1	PF00076.22	3.3e-22	1	2
MGP_AKRJ_P0082685	RRM_1	PF00076.22	3.3e-22	2	2
MGP_AKRJ_P0082686	RRM_1	PF00076.22	4.2e-22	1	2
MGP_AKRJ_P0082686	RRM_1	PF00076.22	4.2e-22	2	2
MGP_AKRJ_P0082683	RRM_1	PF00076.22	1.6e-16	1	1
MGP_AKRJ_P0082684	RRM_1	PF00076.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0082689	-	504	-	-	- (aa)	-	-
MGP_AKRJ_T0082688	-	1850	-	MGP_AKRJ_P0082688	201 (aa)	-	-
MGP_AKRJ_T0082687	-	2426	-	-	- (aa)	-	-
MGP_AKRJ_T0082686	-	2180	-	MGP_AKRJ_P0082686	614 (aa)	-	-
MGP_AKRJ_T0082685	-	2142	-	MGP_AKRJ_P0082685	586 (aa)	-	-
MGP_AKRJ_T0082684	-	502	-	MGP_AKRJ_P0082684	112 (aa)	-	-
MGP_AKRJ_T0082683	-	1898	-	MGP_AKRJ_P0082683	456 (aa)	-	-
MGP_AKRJ_T0082682	-	2275	-	-	- (aa)	-	-
MGP_AKRJ_T0082681	-	2679	XM_006539556	MGP_AKRJ_P0082681	586 (aa)	XP_006539619	Q8R081
MGP_AKRJ_T0082690	-	633	-	-	- (aa)	-	-
MGP_AKRJ_T0082691	-	1087	-	-	- (aa)	-	-
MGP_AKRJ_T0082692	-	768	-	-	- (aa)	-	-
MGP_AKRJ_T0082693	-	672	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0031872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0031872's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0031872	Hnrnpl	95	30.045	MGP_AKRJ_G0017402	Ptbp1	80	30.583
MGP_AKRJ_G0031872	Hnrnpl	77	30.645	MGP_AKRJ_G0027750	Ptbp2	77	30.645
MGP_AKRJ_G0031872	Hnrnpl	55	36.207	MGP_AKRJ_G0028246	Ptbp3	83	35.537
MGP_AKRJ_G0031872	Hnrnpl	100	63.393	MGP_AKRJ_G0023981	Hnrnpll	79	58.065