EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0032424 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 91914 bases
Position: chr7:95143514-95235427
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0084997	MMR_HSR1	PF01926.23	2.4e-05	1	1
MGP_AKRJ_P0084998	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0084999	-	1304	-	MGP_AKRJ_P0084999	175 (aa)	-	-
MGP_AKRJ_T0084998	-	1406	-	MGP_AKRJ_P0084998	203 (aa)	-	-
MGP_AKRJ_T0084997	-	2038	XM_006508293	MGP_AKRJ_P0084997	203 (aa)	XP_006508356	Q923S9

Gene Model

Click here to download MGP_AKRJ_G0032424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0032424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0032424	Rab30	79	42.857	MGP_AKRJ_G0032484	Rab6a	77	42.857
MGP_AKRJ_G0032424	Rab30	77	35.625	MGP_AKRJ_G0018704	Rab34	62	35.625
MGP_AKRJ_G0032424	Rab30	76	42.857	MGP_AKRJ_G0023906	Rab31	79	42.857
MGP_AKRJ_G0032424	Rab30	88	47.778	MGP_AKRJ_G0023915	Rab12	62	47.778
MGP_AKRJ_G0032424	Rab30	87	37.500	MGP_AKRJ_G0015842	Rab23	74	37.500
MGP_AKRJ_G0032424	Rab30	79	34.756	MGP_AKRJ_G0022175	Rabl2	70	34.756
MGP_AKRJ_G0032424	Rab30	80	42.331	MGP_AKRJ_G0026897	Rab22a	84	42.331
MGP_AKRJ_G0032424	Rab30	89	34.426	MGP_AKRJ_G0033128	Hras	94	34.426
MGP_AKRJ_G0032424	Rab30	88	38.043	MGP_AKRJ_G0030902	Rab7	92	42.222
MGP_AKRJ_G0032424	Rab30	86	43.678	MGP_AKRJ_G0023815	Rab5a	81	43.678
MGP_AKRJ_G0032424	Rab30	82	50.000	MGP_AKRJ_G0024632	Rab1b	83	50.000
MGP_AKRJ_G0032424	Rab30	81	47.059	MGP_AKRJ_G0027127	Rab33b	74	47.059
MGP_AKRJ_G0032424	Rab30	84	45.614	MGP_AKRJ_G0021227	Rab2b	81	48.718
MGP_AKRJ_G0032424	Rab30	97	41.546	MGP_AKRJ_G0027328	Rab25	96	41.546
MGP_AKRJ_G0032424	Rab30	80	48.466	MGP_AKRJ_G0019310	Rab37	75	48.466
MGP_AKRJ_G0032424	Rab30	83	42.012	MGP_AKRJ_G0019104	Rab5c	78	42.012
MGP_AKRJ_G0032424	Rab30	89	40.556	MGP_AKRJ_G0025597	Rab14	91	43.478
MGP_AKRJ_G0032424	Rab30	86	42.529	MGP_AKRJ_G0019799	Rab15	82	42.529
MGP_AKRJ_G0032424	Rab30	78	38.272	MGP_AKRJ_G0017288	Rab36	61	38.272
MGP_AKRJ_G0032424	Rab30	84	34.503	MGP_AKRJ_G0027614	Nras	96	34.932
MGP_AKRJ_G0032424	Rab30	97	39.524	MGP_AKRJ_G0023460	Rab11b	96	39.524
MGP_AKRJ_G0032424	Rab30	79	41.615	MGP_AKRJ_G0035105	Rab6b	77	41.615
MGP_AKRJ_G0032424	Rab30	82	31.737	MGP_AKRJ_G0029273	Rheb	88	31.737
MGP_AKRJ_G0032424	Rab30	86	50.286	MGP_AKRJ_G0029878	Rab35	86	50.286
MGP_AKRJ_G0032424	Rab30	83	47.929	MGP_AKRJ_G0024062	Rab18	82	47.929
MGP_AKRJ_G0032424	Rab30	82	50.602	MGP_AKRJ_G0018001	Rab1a	81	50.602
MGP_AKRJ_G0032424	Rab30	97	37.981	MGP_AKRJ_G0034853	Rab11a	91	44.604
MGP_AKRJ_G0032424	Rab30	81	51.176	MGP_AKRJ_G0035597	Rab33a	72	51.176
MGP_AKRJ_G0032424	Rab30	90	42.391	MGP_AKRJ_G0027963	Rab2a	87	42.391
MGP_AKRJ_G0032424	Rab30	79	39.157	MGP_AKRJ_G0036011	Rab9b	82	39.157
MGP_AKRJ_G0032424	Rab30	81	33.735	MGP_AKRJ_G0035082	Mras	79	33.735
MGP_AKRJ_G0032424	Rab30	81	32.317	MGP_AKRJ_G0031489	Rasl2-9	75	32.317
MGP_AKRJ_G0032424	Rab30	87	33.146	MGP_AKRJ_G0031382	Kras	93	33.146
MGP_AKRJ_G0032424	Rab30	78	48.447	MGP_AKRJ_G0035770	Rab39b	76	48.447