EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0032484 (Gene tree)
Gene ID: -
Gene Symbol: Rab6a
Alias: 2610028L11Rik|AA419671|Rab6|Rab6 {ECO:0000313|EMBL:EDL16462.1,GN ECO:0000313|MGI:MGI:894313}|Rab6 {ECO:0000313|EMBL:EDL16464.1,GN ECO:0000313|MGI:MGI:894313}|Rab6A
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 37256 bases
Position: chr7:103291792-103329047
Accession: 894313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0085254	MMR_HSR1	PF01926.23	9.2e-05	1	1
MGP_AKRJ_P0085255	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0085253	-	2613	-	MGP_AKRJ_P0085253	175 (aa)	-	P35279
MGP_AKRJ_T0085255	-	3106	-	MGP_AKRJ_P0085255	208 (aa)	-	-
MGP_AKRJ_T0085254	-	3210	-	MGP_AKRJ_P0085254	208 (aa)	-	-
MGP_AKRJ_T0085256	-	567	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0032484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0032484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0032484	Rab6a	91	38.462	MGP_AKRJ_G0027963	Rab2a	89	38.462
MGP_AKRJ_G0032484	Rab6a	75	38.217	MGP_AKRJ_G0023460	Rab11b	72	38.217
MGP_AKRJ_G0032484	Rab6a	79	33.721	MGP_AKRJ_G0036011	Rab9b	84	33.721
MGP_AKRJ_G0032484	Rab6a	76	40.252	MGP_AKRJ_G0023915	Rab12	55	40.252
MGP_AKRJ_G0032484	Rab6a	56	30.000	MGP_AKRJ_G0019147	Arl4d	58	30.000
MGP_AKRJ_G0032484	Rab6a	77	40.828	MGP_AKRJ_G0021227	Rab2b	79	43.421
MGP_AKRJ_G0032484	Rab6a	75	32.278	MGP_AKRJ_G0031382	Kras	83	32.278
MGP_AKRJ_G0032484	Rab6a	95	36.634	MGP_AKRJ_G0024062	Rab18	94	36.634
MGP_AKRJ_G0032484	Rab6a	95	37.561	MGP_AKRJ_G0035597	Rab33a	86	37.561
MGP_AKRJ_G0032484	Rab6a	74	39.610	MGP_AKRJ_G0029878	Rab35	89	35.789
MGP_AKRJ_G0032484	Rab6a	77	42.857	MGP_AKRJ_G0032424	Rab30	79	42.857
MGP_AKRJ_G0032484	Rab6a	75	39.623	MGP_AKRJ_G0035770	Rab39b	75	39.623
MGP_AKRJ_G0032484	Rab6a	100	90.865	MGP_AKRJ_G0035105	Rab6b	100	90.865
MGP_AKRJ_G0032484	Rab6a	93	38.384	MGP_AKRJ_G0024632	Rab1b	96	38.384
MGP_AKRJ_G0032484	Rab6a	75	35.625	MGP_AKRJ_G0029273	Rheb	85	35.625
MGP_AKRJ_G0032484	Rab6a	90	36.458	MGP_AKRJ_G0019799	Rab15	91	36.458
MGP_AKRJ_G0032484	Rab6a	88	31.915	MGP_AKRJ_G0022175	Rabl2	83	31.915
MGP_AKRJ_G0032484	Rab6a	84	44.000	MGP_AKRJ_G0019104	Rab5c	81	44.000
MGP_AKRJ_G0032484	Rab6a	94	36.000	MGP_AKRJ_G0030902	Rab7	91	47.191
MGP_AKRJ_G0032484	Rab6a	94	35.784	MGP_AKRJ_G0027127	Rab33b	86	35.784
MGP_AKRJ_G0032484	Rab6a	94	36.232	MGP_AKRJ_G0025597	Rab14	95	36.232
MGP_AKRJ_G0032484	Rab6a	75	32.911	MGP_AKRJ_G0027614	Nras	98	33.557
MGP_AKRJ_G0032484	Rab6a	94	36.150	MGP_AKRJ_G0017288	Rab36	80	36.150
MGP_AKRJ_G0032484	Rab6a	81	39.053	MGP_AKRJ_G0026897	Rab22a	87	39.053
MGP_AKRJ_G0032484	Rab6a	95	30.151	MGP_AKRJ_G0033128	Hras	98	30.151
MGP_AKRJ_G0032484	Rab6a	98	41.546	MGP_AKRJ_G0023815	Rab5a	95	41.546
MGP_AKRJ_G0032484	Rab6a	85	37.634	MGP_AKRJ_G0018704	Rab34	72	37.634
MGP_AKRJ_G0032484	Rab6a	94	38.384	MGP_AKRJ_G0018001	Rab1a	94	38.384
MGP_AKRJ_G0032484	Rab6a	80	38.922	MGP_AKRJ_G0023906	Rab31	86	38.922
MGP_AKRJ_G0032484	Rab6a	76	32.500	MGP_AKRJ_G0035082	Mras	76	32.500
MGP_AKRJ_G0032484	Rab6a	88	34.239	MGP_AKRJ_G0027328	Rab25	86	34.239
MGP_AKRJ_G0032484	Rab6a	84	35.955	MGP_AKRJ_G0034853	Rab11a	84	38.281
MGP_AKRJ_G0032484	Rab6a	76	39.873	MGP_AKRJ_G0015842	Rab23	66	39.873
MGP_AKRJ_G0032484	Rab6a	77	42.857	MGP_AKRJ_G0019310	Rab37	75	42.857
MGP_AKRJ_G0032484	Rab6a	77	30.769	MGP_AKRJ_G0030280	Rasl11a	69	30.769